RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 RIPPLY2Q5TAB7 128 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 SOX7Q9BT81 388 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 MMP9P14780 707 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 ZNF766Q5HY98 468 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 ABHD14BQ96IU4 210 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 TMEM147Q9BVK8 224 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 TMEM9BQ9NQ34 198 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 A0A1W2PPE2 198 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 LOC390937A0A1W2PQ73 354 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 H3BQ15 152 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 TRAT1Q6PIZ9 186 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 VOPP1Q96AW1 172 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 GPR87Q9BY21 358 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 TMEM222Q9H0R3 208 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 SEC14L6B5MCN3 397 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 RD3LP0DJH9 198 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 MPLP40238 635 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 TIGITQ495A1 244 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 TUBG2Q9NRH3 451 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 HLA-GP17693 338 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 OR3A1P47881 315 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 CLEC12BQ2HXU8 276 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 LY6G6FQ5SQ64 297 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-206ENST00000445265 TMEM252Q8N6L7 170 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 SLC35E1Q96K37 410 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 RSRP1Q9BUV0 290 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 OR2D2Q9H210 308 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
TCOF1-206ENST00000445265 RPS2P15880 293 aaKnown RBP14.46□□□□□ -0.1
TCOF1-206ENST00000445265 MST1P26927 711 aa14.46□□□□□ -0.1
TCOF1-206ENST00000445265 KCNMB1Q16558 191 aa14.46□□□□□ -0.1
TCOF1-206ENST00000445265 DPPA3Q6W0C5 159 aa14.46□□□□□ -0.1
TCOF1-206ENST00000445265 MT-CO3P00414 261 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 MGST1P10620 155 aaKnown RBP14.45□□□□□ -0.1
TCOF1-206ENST00000445265 NDUFB7P17568 137 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 FGF12P61328 243 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 RTL8BQ17RB0 113 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 SNAI3Q3KNW1 292 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 SCN8AQ9UQD0 1980 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 HSBP1L1C9JCN9 74 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 DLK1P80370 383 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 MDC1Q14676 2089 aaKnown RBP14.45□□□□□ -0.1
TCOF1-206ENST00000445265 ZNF320A2RRD8 509 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 ACTL6AO96019 429 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 SUB1P53999 127 aaKnown RBP eCLIP14.45□□□□□ -0.1
TCOF1-206ENST00000445265 KHDC3LQ587J8 217 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 ZNF66Q6ZN08 573 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 S100A7AQ86SG5 101 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 CXorf67Q86X51 503 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-206ENST00000445265 HS3ST3B1Q9Y662 390 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 B4E171 279 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 M0R1X1 148 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 FABP4P15090 132 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 ZNF708P17019 499 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 TSPAN7P41732 249 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 PMS2CLQ68D20 193 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 CPEB3Q8NE35 698 aaKnown RBP14.45□□□□□ -0.1
TCOF1-206ENST00000445265 RTN4RQ9BZR6 473 aa14.45□□□□□ -0.1
TCOF1-206ENST00000445265 TRAV20A0A0B4J274 112 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 IL3RAP26951 378 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 UBE2G2P60604 165 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 CEACAM21Q3KPI0 293 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 OR10G4Q8NGN3 311 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 OR10G9Q8NGN4 311 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 OR10G7Q8NGN6 311 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 AP1S3Q96PC3 154 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 A0A1W2PQM1 296 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 RRP8O43159 456 aaKnown RBP14.44□□□□□ -0.1
TCOF1-206ENST00000445265 PCOLCEQ15113 449 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 IGSF11Q5DX21 431 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 FAM131CQ96AQ9 280 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 TIMP4Q99727 224 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 EGLN1Q9GZT9 426 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 VAX2Q9UIW0 290 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 FREM3P0C091 2139 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 G3V3Q6 166 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 MAGEA5P43359 124 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 FGF8P55075 233 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-206ENST00000445265 RFESDQ8TAC1 157 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 TMEM54Q969K7 222 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 SLC25A22Q9H936 323 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 PSG11Q9UQ72 335 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 F2RP25116 425 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 MPZP25189 248 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 OR2M7Q8NG81 312 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 TM2D1Q9BX74 207 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 NAT8Q9UHE5 227 aa14.44□□□□□ -0.1
TCOF1-206ENST00000445265 ELOA3CA0A087WX78 387 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-206ENST00000445265 ZNF735P0CB33 412 aa14.43□□□□□ -0.1
TCOF1-206ENST00000445265 PMELP40967 661 aa14.43□□□□□ -0.1
TCOF1-206ENST00000445265 UCP3P55916 312 aa14.43□□□□□ -0.1
TCOF1-206ENST00000445265 MRGPRGQ86SM5 289 aa14.43□□□□□ -0.1
TCOF1-206ENST00000445265 DEFB108BQ8NET1 73 aa14.43□□□□□ -0.1
TCOF1-206ENST00000445265 H1FXQ92522 213 aaKnown RBP14.43□□□□□ -0.1
TCOF1-206ENST00000445265 MRGPRFQ96AM1 343 aa14.43□□□□□ -0.1
TCOF1-206ENST00000445265 DECR2Q9NUI1 292 aa14.43□□□□□ -0.1
TCOF1-206ENST00000445265 MTCH1Q9NZJ7 389 aa14.43□□□□□ -0.1
TCOF1-206ENST00000445265 TRAV17A0A0B4J275 112 aa14.43□□□□□ -0.1
TCOF1-206ENST00000445265 A0A1W2PR80 420 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms