RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 DEFB121Q5J5C9 76 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 ZNF529Q6P280 563 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 DRAM1Q8N682 238 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 RFESDQ8TAC1 157 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 CHPT1Q8WUD6 406 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 LEAP2Q969E1 77 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 AMBNQ9NP70 447 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 H3BNX3 289 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 GABRPO00591 440 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 FGF16O43320 207 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 IGHV3-7P01780 117 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 CD2P06729 351 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 TMEM11P17152 192 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 GZMHP20718 246 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 SLC6A1P30531 599 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 KLHL22Q53GT1 634 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 VAX1Q5SQQ9 334 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 RSBN1Q5VWQ0 802 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-219ENST00000440240 LPCAT4Q643R3 524 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 ASCL4Q6XD76 172 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 ZNF329Q86UD4 541 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 C10orf67Q8IYJ2 551 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 C5orf56Q8N8D9 126 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 LINC00482Q8N8I6 264 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 OR10X1Q8NGY0 326 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 MRGPRDQ8TDS7 321 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 DPF1Q92782 380 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 ZFP57Q9NU63 452 aa16.44■□□□□ 0.22
CPNE1-219ENST00000440240 MRPS18AQ9NVS2 196 aaKnown RBP16.44■□□□□ 0.22
CPNE1-219ENST00000440240 RPL36Q9Y3U8 105 aaKnown RBP16.44■□□□□ 0.22
CPNE1-219ENST00000440240 A0A1W2PPI3 338 aa16.43■□□□□ 0.22
CPNE1-219ENST00000440240 EGFEM1PQ0D2K5 195 aa16.43■□□□□ 0.22
CPNE1-219ENST00000440240 HNF4GQ14541 408 aa16.43■□□□□ 0.22
CPNE1-219ENST00000440240 LTC4SQ16873 150 aa16.43■□□□□ 0.22
CPNE1-219ENST00000440240 MRPL41Q8IXM3 137 aaKnown RBP16.43■□□□□ 0.22
CPNE1-219ENST00000440240 COMMD1Q8N668 190 aa16.43■□□□□ 0.22
CPNE1-219ENST00000440240 GPR148Q8TDV2 347 aa16.43■□□□□ 0.22
CPNE1-219ENST00000440240 MCRIP2Q9BUT9 160 aaKnown RBP16.43■□□□□ 0.22
CPNE1-219ENST00000440240 JAM3Q9BX67 310 aa16.43■□□□□ 0.22
CPNE1-219ENST00000440240 FAM192AQ9GZU8 254 aa16.43■□□□□ 0.22
CPNE1-219ENST00000440240 FAM118AQ9NWS6 357 aa16.43■□□□□ 0.22
CPNE1-219ENST00000440240 SERPINE3A8MV23 424 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 HTR3BO95264 441 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 GNG10P50151 68 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 KRTAP10-11P60412 298 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 RPL23AP62750 156 aaKnown RBP16.42■□□□□ 0.22
CPNE1-219ENST00000440240 SLC35B1P78383 322 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 PIGYQ3MUY2 71 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 CCDC58Q4VC31 144 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 OR51A2Q8NGJ7 313 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 OR52I1Q8NGK6 324 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 OR10K1Q8NGX5 313 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 PLPPR1Q8TBJ4 325 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 C9orf16Q9BUW7 83 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 DPCDQ9BVM2 203 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-219ENST00000440240 IFT22Q9H7X7 185 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 ST3GAL6Q9Y274 331 aa16.42■□□□□ 0.22
CPNE1-219ENST00000440240 LOC100130705A0A1B0GUX0 176 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 GAPDHP04406 335 aaKnown RBP16.41■□□□□ 0.22
CPNE1-219ENST00000440240 SOX2P48431 317 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 THBS3P49746 956 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 DIAPH2-AS1Q14236 149 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 NHLRC3Q5JS37 347 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 OR2W3Q7Z3T1 314 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 FOXRED2Q8IWF2 684 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 SUMF2Q8NBJ7 301 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 NOL4LQ96MY1 436 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-219ENST00000440240 METTL9Q9H1A3 318 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 TMEM138Q9NPI0 162 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 PAK1IP1Q9NWT1 392 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-219ENST00000440240 ING4Q9UNL4 249 aa16.41■□□□□ 0.22
CPNE1-219ENST00000440240 WI2-2373I1.2A0A1W2PRP0 233 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 OR7C1O76099 320 aaPredicted RBP16.4■□□□□ 0.22
CPNE1-219ENST00000440240 IGKV1D-33P01593 117 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 IGKV1-33P01594 117 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 IGHG2P01859 326 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 CSTBP04080 98 aaKnown RBP16.4■□□□□ 0.22
CPNE1-219ENST00000440240 HOXD3P31249 432 aaPredicted RBP16.4■□□□□ 0.22
CPNE1-219ENST00000440240 SSTR5P35346 364 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 MYCNOSP40205 109 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 GTF2A1P52655 376 aaPredicted RBP16.4■□□□□ 0.22
CPNE1-219ENST00000440240 EBI3Q14213 229 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 RPL22L1Q6P5R6 122 aaKnown RBP16.4■□□□□ 0.22
CPNE1-219ENST00000440240 SLC35E3Q7Z769 313 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 OR52M1Q8NGK5 317 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 S100A13Q99584 98 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 TAS2R4Q9NYW5 299 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 IL36GQ9NZH8 169 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 ZMAT5Q9UDW3 170 aaKnown RBP16.4■□□□□ 0.22
CPNE1-219ENST00000440240 NBEAL2Q6ZNJ1 2754 aa16.4■□□□□ 0.22
CPNE1-219ENST00000440240 NUDT19A8MXV4 375 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 CCRL2O00421 344 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 HSD17B6O14756 317 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 CDRT1O95170 752 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 LIMS3P0CW19 117 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 LIMS4P0CW20 117 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 PPP3R1P63098 170 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 ZNF816Q0VGE8 651 aaPredicted RBP16.39■□□□□ 0.21
CPNE1-219ENST00000440240 ETV3LQ6ZN32 361 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 MOB3BQ86TA1 216 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms