RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ALOX12BO75342 701 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 SFT2D2O95562 160 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 IFNA21P01568 189 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 IGHV2-70P01814 119 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 GAPDHP04406 335 aaKnown RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 S100A8P05109 93 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 CSN2P05814 226 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 LIPFP07098 398 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 HCKP08631 526 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 RNF224P0DH78 156 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 SMIM6P0DI80 62 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 PRKACAP17612 351 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 CCL1P22362 96 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 RBMXP38159 391 aaKnown RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 RPS27P42677 84 aaKnown RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 GUCA1AP43080 201 aaPredicted RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 MAGEB1P43366 347 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 OR3A2P47893 321 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 ATP1B3P54709 279 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 MTCP1P56278 107 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 CLDN6P56747 220 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 RAB5BP61020 215 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 GAGE5Q13069 117 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 GAGE6Q13070 117 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 ATXN7L3Q14CW9 347 aaPredicted RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 THEM4Q5T1C6 240 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 ASPHD2Q6ICH7 369 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 H3F3CQ6NXT2 135 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 OPN5Q6U736 354 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 ABHD12BQ7Z5M8 362 aaPredicted RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 HOGA1Q86XE5 327 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 PRR22Q8IZ63 422 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 METTL27Q8N6F8 245 aaPredicted RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 LFNGQ8NES3 379 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 BPIFCQ8NFQ6 507 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 TSTD1Q8NFU3 115 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 OR5L2Q8NGL0 311 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 OR13C9Q8NGT0 318 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 SLC22A8Q8TCC7 542 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 GPR119Q8TDV5 335 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 CASTOR1Q8WTX7 329 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 PP6455Q8WZ26 134 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 EMG1Q92979 244 aaKnown RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 TSLPQ969D9 159 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 TMEM186Q96B77 213 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 RAB3CQ96E17 227 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 C17orf77Q96MU5 243 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF75AQ96N20 296 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 AMELYQ99218 206 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 GPER1Q99527 375 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 S100A13Q99584 98 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 SLC7A5P2Q9GIP4 190 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 PBOV1Q9GZY1 135 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 ARRDC1-AS1Q9H2J1 176 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 ACKR4Q9NPB9 350 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF701Q9NV72 531 aaPredicted RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 FAM206AQ9NX38 181 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF629Q9UEG4 869 aaPredicted RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 MRPS28Q9Y2Q9 187 aaKnown RBP4.23□□□□□ -1.73
LINC00458-202ENST00000427299 CSAG2Q9Y5P2 127 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 PCDH15Q96QU1 1955 aa4.23□□□□□ -1.73
LINC00458-202ENST00000427299 MYO7BQ6PIF6 2116 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 BORCS7-ASMTA0A0B4J1R7 106 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 A0A1B0GTH9 108 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 PQLC2LA1A4F0 135 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF705EA8MWA4 302 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 EEF1E1-BLOC1S5C9J1V9 151 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 LMO7DNF2Z398 122 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 H3BSH0 61 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 MFNGO00587 321 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 TOX3O15405 576 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 MBTPS2O43462 519 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 SYNGR3O43761 229 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF354AO60765 605 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 PTBP3O95758 552 aaKnown RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 PDGFBP01127 241 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 TGFAP01135 160 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 TTRP02766 147 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 MYOGP15173 224 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 PGAM2P15259 253 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 AKR1C4P17516 323 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 LAP3P28838 519 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 RFC3P40938 356 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 EIF1P41567 113 aaKnown RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 ALDH3B1P43353 468 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 HOXA1P49639 335 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 RAB5CP51148 216 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 RAB13P51153 203 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 GFERP55789 205 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 LINC01547P58512 204 aaPredicted RBP4.22□□□□□ -1.73
LINC00458-202ENST00000427299 SRPXP78539 464 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 PJVKQ0ZLH3 352 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 FOXF1Q12946 379 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 PLA2G7Q13093 441 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 UNC119Q13432 240 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 ARFRP1Q13795 201 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 OR7A5Q15622 319 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 NSDHLQ15738 373 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 SLC25A53Q5H9E4 307 aa4.22□□□□□ -1.73
LINC00458-202ENST00000427299 FAM74A1Q5RGS3 127 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms