RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 PARP11Q9NR21 331 aa6.49□□□□□ -1.37
NIF3L1-206ENST00000416651 ZNF107Q9UII5 783 aaPredicted RBP6.49□□□□□ -1.37
NIF3L1-206ENST00000416651 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
NIF3L1-206ENST00000416651 IGHV7-81A0A0B4J1V7 117 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 TRAV41A0A0B4J266 112 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 TMEM269A0A1B0GVZ9 245 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 ZNF785A8K8V0 405 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 RTL8CO15255 209 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 SLC31A2O15432 143 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 MPZL2O60487 215 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 SRSF10O75494 262 aaKnown RBP6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 DHRS3O75911 302 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 GADD45GO95257 159 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 GASTP01350 101 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 HTR1FP30939 366 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 VHLP40337 213 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 RAB7AP51149 207 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 CD81P60033 236 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 DEFA5Q01523 94 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 ZNF816Q0VGE8 651 aaPredicted RBP6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 DYRK1AQ13627 763 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 ECSCRQ19T08 205 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 C19orf54Q5BKX5 351 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 SLX4IPQ5VYV7 408 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 Q6P435 159 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 IZUMO1Q8IYV9 350 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 FAM58AQ8N1B3 248 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 MINDY2Q8NBR6 621 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 BBS1Q8NFJ9 593 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 OR2T10Q8NGZ9 312 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 GNPDA2Q8TDQ7 276 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 SH3GL1Q99961 368 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 OSBPL10Q9BXB5 764 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 DCAF13Q9NV06 445 aaKnown RBP6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 CALYQ9NYX4 217 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 IL20Q9NYY1 176 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 IDI2-AS1Q9NZ38 188 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 OR6C3Q9NZP0 311 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 ZNF581Q9P0T4 197 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 COPS3Q9UNS2 423 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 GSTK1Q9Y2Q3 226 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 FAM32AQ9Y421 112 aaKnown RBP6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 V9GYS6 101 aa6.48□□□□□ -1.37
NIF3L1-206ENST00000416651 IGHV3-43A0A0B4J1X8 118 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 KBTBD11-OT1A0A1B0GTJ5 212 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 A0A1W2PN81 502 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 ANKRD34BA5PLL1 514 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 ZNF729A6NN14 1252 aaPredicted RBP6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 DLGAP1O14490 977 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 HSPB6O14558 160 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 XRCC3O43542 346 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 MOSP00540 346 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 SEMG1P04279 462 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 HSPB1P04792 205 aaKnown RBP6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 CSN3P07498 182 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 IGHV3-43DP0DP04 118 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 EGR2P11161 476 aaPredicted RBP6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 ALOX5APP20292 161 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 SSTR5P35346 364 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 CHRNA7P36544 502 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 GLP1RP43220 463 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 KIR3DL2P43630 455 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 ZNF146Q15072 292 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 LRRC36Q1X8D7 754 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 ODF4Q2M2E3 257 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 KRBOX4Q5JUW0 171 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 SHFQ7M4L6 423 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 LYG2Q86SG7 212 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 PHLDA1Q8WV24 401 aaPredicted RBP6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 FAM162AQ96A26 154 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 RFT1Q96AA3 541 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 TLCD1Q96CP7 247 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 SPACA5Q96QH8 159 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 NEURL2Q9BR09 285 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 KRTAP3-1Q9BYR8 98 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 PCDHB16Q9NRJ7 776 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 NKIRAS1Q9NYS0 192 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 KIF25Q9UIL4 384 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 AMMECR1Q9Y4X0 333 aaPredicted RBP6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 A3GALT2U3KPV4 340 aa6.47□□□□□ -1.37
NIF3L1-206ENST00000416651 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.37
NIF3L1-206ENST00000416651 PRSS29PA6NIE9 313 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 SLC33A1O00400 549 aaPredicted RBP6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 GSTA4O15217 222 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 CNIH1O95406 144 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 TRBV12-3P01733 135 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 H2AFXP16104 143 aaPredicted RBP6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 RRM2P31350 389 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 MECP2P51608 486 aaKnown RBP6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 SYNJ2BPP57105 145 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 TRIM25Q14258 630 aaKnown RBP6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 OR52L1Q8NGH7 329 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 OR10X1Q8NGY0 326 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 PLPPR1Q8TBJ4 325 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 MRGPRDQ8TDS7 321 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 RTN4IP1Q8WWV3 396 aaPredicted RBP6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 TMEM106AQ96A25 262 aa6.46□□□□□ -1.38
NIF3L1-206ENST00000416651 RCN3Q96D15 328 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms