RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TSPAN5P62079 268 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 IL13RA1P78552 427 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 EDDM3AQ14507 147 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 KIR2DS1Q14954 304 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 ZMYND11Q15326 602 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 TMEM185AQ8NFB2 350 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 UPRTQ96BW1 309 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 KIF25Q9UIL4 384 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 hCG_2014768A0A024R1R8 64 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 A0A1B0GW55 424 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 TRDCB7Z8K6 153 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 SIGLEC5O15389 551 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 DUX4L2P0CJ85 424 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 DUX4L3P0CJ86 424 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 DUX4L4P0CJ87 422 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 DUX4L5P0CJ88 424 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 DUX4L6P0CJ89 424 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 DUX4L7P0CJ90 424 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 SELLP14151 372 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 RCC1P18754 421 aaPredicted RBP17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 RBMS2Q15434 407 aaKnown RBP17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 DUX4L9Q6RFH8 374 aaPredicted RBP17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 IDO2Q6ZQW0 420 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 OVCH2Q7RTZ1 564 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 SLC36A1Q7Z2H8 476 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 TMEM17Q86X19 198 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 ARRDC1Q8N5I2 433 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 FAM216BQ8N7L0 139 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 CREB3L1Q96BA8 519 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 MED30Q96HR3 178 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 CCL19Q99731 98 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 FAM234AQ9H0X4 552 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 NUDT15Q9NV35 164 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 DUX4Q9UBX2 424 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 MGAT4AQ9UM21 535 aa17.02■□□□□ 0.32
VCPKMT-202ENST00000395860 COL12A1Q99715 3063 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 TRAV6A0A075B6T7 132 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 MEIKINA0A087WXM9 373 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 TRAV39A0A0B4J263 110 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 OVOL3O00110 214 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 F12P00748 615 aaPredicted RBP17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 GLIPR1P48060 266 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 PAX5Q02548 391 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 BTN2A1Q7KYR7 527 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 TPRX1Q8N7U7 411 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 TMEM246Q9BRR3 403 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 GINS4Q9BRT9 223 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 SLC2A8Q9NY64 477 aa17.02■□□□□ 0.31
VCPKMT-202ENST00000395860 FABP7O15540 132 aa17.01■□□□□ 0.31
VCPKMT-202ENST00000395860 NDUFA2O43678 99 aa17.01■□□□□ 0.31
VCPKMT-202ENST00000395860 NDUFB6O95139 128 aa17.01■□□□□ 0.31
VCPKMT-202ENST00000395860 COL8A1P27658 744 aa17.01■□□□□ 0.31
VCPKMT-202ENST00000395860 EFNA4P52798 201 aa17.01■□□□□ 0.31
VCPKMT-202ENST00000395860 HLA-DRB3P79483 266 aa17.01■□□□□ 0.31
VCPKMT-202ENST00000395860 MARVELD1Q9BSK0 173 aa17.01■□□□□ 0.31
VCPKMT-202ENST00000395860 C20orf85Q9H1P6 137 aa17.01■□□□□ 0.31
VCPKMT-202ENST00000395860 MBNL3Q9NUK0 354 aaKnown RBP17.01■□□□□ 0.31
VCPKMT-202ENST00000395860 ADAM20O43506 726 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 NDUFS7O75251 213 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 FSTL3O95633 263 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 SCTP09683 121 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 OR5H8P0DN80 308 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 EDDM3BP56851 147 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 ZNF295-AS1Q8N0V1 137 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 TIMD4Q96H15 378 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 CHODLQ9H9P2 273 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 KCNIP1Q9NZI2 227 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 INMT-MINDY4F8WBC2 141 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 TNFRSF13BO14836 293 aaPredicted RBP17■□□□□ 0.31
VCPKMT-202ENST00000395860 IGHV2-70P01814 119 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 H2AFB2P0C5Z0 115 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 SEC61A1P61619 476 aaKnown RBP17■□□□□ 0.31
VCPKMT-202ENST00000395860 C5orf24Q7Z6I8 188 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 IGFBPL1Q8WX77 278 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 RAB1CQ92928 201 aa17■□□□□ 0.31
VCPKMT-202ENST00000395860 SPTAN1Q13813 2472 aaKnown RBP16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 FUOMA2VDF0 154 aa16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 PPIHO43447 177 aaKnown RBP16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 RAB25P57735 213 aa16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 IGSF11Q5DX21 431 aa16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 AVPI1Q5T686 147 aa16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 LYPD2Q6UXB3 125 aa16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 MUC20Q8N307 709 aaPredicted RBP16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 OR4A4PQ8NGN8 299 aa16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 OR6F1Q8NGZ6 308 aa16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 SLC25A21Q9BQT8 299 aaPredicted RBP16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 SLC25A10Q9UBX3 287 aaPredicted RBP16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 FLVCR2Q9UPI3 526 aa16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 KIAA2026Q5HYC2 2103 aa16.99■□□□□ 0.31
VCPKMT-202ENST00000395860 ODAMA1E959 279 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 ARPC1BO15143 372 aaKnown RBP16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 ERP29P30040 261 aaKnown RBP16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 GLP1RP43220 463 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 P2RX3P56373 397 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 CARTPTQ16568 116 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 C6orf183Q5T699 404 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 PRR18Q8N4B5 295 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 OR13C8Q8NGS7 320 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 TERB2Q8NHR7 220 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 MRGPRDQ8TDS7 321 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms