RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 DUS4LO95620 317 aaKnown RBP13.36□□□□□ -0.27
SMN2-201ENST00000380741 CLIC3O95833 236 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 RAB3AP20336 220 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 SSTR5P35346 364 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 GNG10P50151 68 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 PAX5Q02548 391 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 RAB40BQ12829 278 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 MADCAM1Q13477 382 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 RSU1Q15404 277 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 LINC00482Q8N8I6 264 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 OR52I1Q8NGK6 324 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 RHOXF1Q8NHV9 184 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 RFESDQ8TAC1 157 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 Q96MT0 163 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 JAM3Q9BX67 310 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 TAS2R4Q9NYW5 299 aa13.36□□□□□ -0.27
SMN2-201ENST00000380741 TRAV39A0A0B4J263 110 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 MAGEB3O15480 346 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 MPZL2O60487 215 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 TMEM11P17152 192 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 SOX2P48431 317 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 GTF2A1P52655 376 aaPredicted RBP13.35□□□□□ -0.27
SMN2-201ENST00000380741 GBX2P52951 348 aaPredicted RBP13.35□□□□□ -0.27
SMN2-201ENST00000380741 HES1Q14469 280 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 ZFP1Q6P2D0 407 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 ETV3LQ6ZN32 361 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 C5orf56Q8N8D9 126 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 Q8NFD4 153 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 NOL4LQ96MY1 436 aaPredicted RBP13.35□□□□□ -0.27
SMN2-201ENST00000380741 ZNF581Q9P0T4 197 aa13.35□□□□□ -0.27
SMN2-201ENST00000380741 A0A1W2PPE3 182 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 WI2-2373I1.2A0A1W2PRP0 233 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 HTR3BO95264 441 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 IGKV1D-33P01593 117 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 IGKV1-33P01594 117 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 HOXD3P31249 432 aaPredicted RBP13.34□□□□□ -0.27
SMN2-201ENST00000380741 KCNJ3P48549 501 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 RAB7AP51149 207 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 RPL23AP62750 156 aaKnown RBP13.34□□□□□ -0.27
SMN2-201ENST00000380741 HNF4GQ14541 408 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 ASCL4Q6XD76 172 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 MRPL41Q8IXM3 137 aaKnown RBP13.34□□□□□ -0.27
SMN2-201ENST00000380741 OR8H3Q8N146 312 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 OR10X1Q8NGY0 326 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 HAVCR2Q8TDQ0 301 aa13.34□□□□□ -0.27
SMN2-201ENST00000380741 DPCDQ9BVM2 203 aaPredicted RBP13.34□□□□□ -0.27
SMN2-201ENST00000380741 MRPS18AQ9NVS2 196 aaKnown RBP13.34□□□□□ -0.27
SMN2-201ENST00000380741 NBEAL2Q6ZNJ1 2754 aa13.33□□□□□ -0.27
SMN2-201ENST00000380741 LOC100130705A0A1B0GUX0 176 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 FGF16O43320 207 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 CDRT1O95170 752 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 LIMS3P0CW19 117 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 LIMS4P0CW20 117 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 EGFEM1PQ0D2K5 195 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 XAF1Q6GPH4 301 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 C18orf65Q6ZTR6 163 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 SUMF2Q8NBJ7 301 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 OR10A7Q8NGE5 316 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 OR51D1Q8NGF3 324 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 CHPT1Q8WUD6 406 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 APH1BQ8WW43 257 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 SLC29A1Q99808 456 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 C9orf16Q9BUW7 83 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 LINC00527Q9UJ94 153 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 ST3GAL6Q9Y274 331 aa13.33□□□□□ -0.28
SMN2-201ENST00000380741 RPL36Q9Y3U8 105 aaKnown RBP13.33□□□□□ -0.28
SMN2-201ENST00000380741 SERPINE3A8MV23 424 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 HSD17B6O14756 317 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 OR7C1O76099 320 aaPredicted RBP13.32□□□□□ -0.28
SMN2-201ENST00000380741 CD2P06729 351 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 THBS3P49746 956 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 RBM11P57052 281 aaKnown RBP13.32□□□□□ -0.28
SMN2-201ENST00000380741 DEFB121Q5J5C9 76 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 SLC16A12Q6ZSM3 486 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 C8orf86Q6ZUL3 223 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 OR2W3Q7Z3T1 314 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 GPR148Q8TDV2 347 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 TMEM106AQ96A25 262 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 IFT22Q9H7X7 185 aa13.32□□□□□ -0.28
SMN2-201ENST00000380741 GEMIN2O14893 280 aaKnown RBP13.31□□□□□ -0.28
SMN2-201ENST00000380741 ZNF816Q0VGE8 651 aaPredicted RBP13.31□□□□□ -0.28
SMN2-201ENST00000380741 SMN1Q16637 294 aaKnown RBP13.31□□□□□ -0.28
SMN2-201ENST00000380741 KLHL22Q53GT1 634 aa13.31□□□□□ -0.28
SMN2-201ENST00000380741 NHLRC3Q5JS37 347 aa13.31□□□□□ -0.28
SMN2-201ENST00000380741 VAX1Q5SQQ9 334 aa13.31□□□□□ -0.28
SMN2-201ENST00000380741 C11orf87Q6NUJ2 197 aa13.31□□□□□ -0.28
SMN2-201ENST00000380741 RPL22L1Q6P5R6 122 aaKnown RBP13.31□□□□□ -0.28
SMN2-201ENST00000380741 SLC35E3Q7Z769 313 aa13.31□□□□□ -0.28
SMN2-201ENST00000380741 METTL9Q9H1A3 318 aa13.31□□□□□ -0.28
SMN2-201ENST00000380741 FAM118AQ9NWS6 357 aa13.31□□□□□ -0.28
SMN2-201ENST00000380741 IL36GQ9NZH8 169 aa13.31□□□□□ -0.28
SMN2-201ENST00000380741 ING4Q9UNL4 249 aa13.31□□□□□ -0.28
SMN2-201ENST00000380741 IGHV1-3A0A0C4DH29 117 aa13.3□□□□□ -0.28
SMN2-201ENST00000380741 TMEM30CPA0ZSE6 113 aa13.3□□□□□ -0.28
SMN2-201ENST00000380741 NUDT19A8MXV4 375 aa13.3□□□□□ -0.28
SMN2-201ENST00000380741 CCRL2O00421 344 aa13.3□□□□□ -0.28
SMN2-201ENST00000380741 IGHG2P01859 326 aa13.3□□□□□ -0.28
SMN2-201ENST00000380741 SERPINA2P20848 420 aa13.3□□□□□ -0.28
SMN2-201ENST00000380741 ZNF93P35789 620 aaPredicted RBP13.3□□□□□ -0.28
SMN2-201ENST00000380741 REG1BP48304 166 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms