RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 UQCC2Q9BRT2 126 aa14.36□□□□□ -0.11
RGP1-201ENST00000378078 C16orf97H3BN30 126 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 HIST1H1EP10412 219 aaKnown RBP14.35□□□□□ -0.11
RGP1-201ENST00000378078 C1QL3Q5VWW1 255 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 PTOV1Q86YD1 416 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 TRDCB7Z8K6 153 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 SOCS1O15524 211 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 CHST1O43916 411 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 TRA2AQ13595 282 aaKnown RBP eCLIP14.35□□□□□ -0.11
RGP1-201ENST00000378078 ST3GAL2Q16842 350 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 TMEM183BQ1AE95 376 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 ATP1A1-AS1Q5TC04 95 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 PCM1Q15154 2024 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 C11orf94C9JXX5 98 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 ATP6V1FQ16864 119 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 HDHD3Q9BSH5 251 aaPredicted RBP14.35□□□□□ -0.11
RGP1-201ENST00000378078 GLRX2Q9NS18 164 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 BEX4Q9NWD9 120 aaPredicted RBP14.35□□□□□ -0.11
RGP1-201ENST00000378078 COLQQ9Y215 455 aaPredicted RBP14.35□□□□□ -0.11
RGP1-201ENST00000378078 ITGBL1O95965 494 aaPredicted RBP14.35□□□□□ -0.11
RGP1-201ENST00000378078 EIF3IQ13347 325 aaKnown RBP14.35□□□□□ -0.11
RGP1-201ENST00000378078 GABRA6Q16445 453 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 LINC01555Q8NAE3 123 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 SGK494Q96LW2 274 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 PRRX2Q99811 253 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 IER3P46695 156 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 SUMO3P55854 103 aaPredicted RBP14.35□□□□□ -0.11
RGP1-201ENST00000378078 KLRB1Q12918 225 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 NCMAPQ5T1S8 102 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 PIMREGQ9BSJ6 248 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 S4R3C0 116 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 H3BTX0 84 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 FAHD1Q6P587 224 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 ASCL5Q7RTU5 278 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 OR10J6PQ8NGY7 276 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 SPSB1Q96BD6 273 aa14.35□□□□□ -0.11
RGP1-201ENST00000378078 MDC1Q14676 2089 aaKnown RBP14.34□□□□□ -0.11
RGP1-201ENST00000378078 A0A1B0GU03 582 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 IGHV3-48P01763 117 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 PSG2P11465 335 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 NKG7Q16617 165 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 HIST3H3Q16695 136 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 RAB29O14966 203 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 NUDT3O95989 172 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 CLLU1Q5K131 121 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 MUC20Q8N307 709 aaPredicted RBP14.34□□□□□ -0.11
RGP1-201ENST00000378078 CCL28Q9NRJ3 127 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 ADAP1O75689 374 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 ASAH1Q13510 395 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 IQCJQ1A5X6 159 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 IZUMO4Q1ZYL8 232 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 RNF212Q495C1 297 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 C1orf185Q5T7R7 199 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 ADAD2Q8NCV1 583 aaKnown RBP14.34□□□□□ -0.11
RGP1-201ENST00000378078 SLC25A19Q9HC21 320 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 ISOC2Q96AB3 205 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 METTL1Q9UBP6 276 aaKnown RBP14.34□□□□□ -0.11
RGP1-201ENST00000378078 A0A1B0GUH1 482 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 TCRBV5S2A0A599 114 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 NKX2-8O15522 239 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 SFT2D2O95562 160 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 APCSP02743 223 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 HEXA-AS1Q9H8Q6 139 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 SIRT7Q9NRC8 400 aa14.34□□□□□ -0.11
RGP1-201ENST00000378078 A0A0B4J293 547 aa14.33□□□□□ -0.11
RGP1-201ENST00000378078 DEDDO75618 318 aa14.33□□□□□ -0.11
RGP1-201ENST00000378078 CLDN14O95500 239 aa14.33□□□□□ -0.11
RGP1-201ENST00000378078 CTLA4P16410 223 aa14.33□□□□□ -0.11
RGP1-201ENST00000378078 OTX1P32242 354 aaPredicted RBP14.33□□□□□ -0.11
RGP1-201ENST00000378078 SNRPEP62304 92 aaKnown RBP14.33□□□□□ -0.11
RGP1-201ENST00000378078 PRB3Q04118 309 aaPredicted RBP14.33□□□□□ -0.11
RGP1-201ENST00000378078 MED30Q96HR3 178 aa14.33□□□□□ -0.11
RGP1-201ENST00000378078 JUNBP17275 347 aaPredicted RBP14.33□□□□□ -0.12
RGP1-201ENST00000378078 HLA-DRB5Q30154 266 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 DDB2Q92466 427 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 LOC107984156A0A0G2JMH3 177 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 AP4M1O00189 453 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 SMPD2O60906 423 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 SMIM18P0DKX4 95 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 LHX8Q68G74 356 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 MRM1Q6IN84 353 aaKnown RBP14.33□□□□□ -0.12
RGP1-201ENST00000378078 ARL17AQ8IVW1 177 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 WSB1Q9Y6I7 421 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 IGHV3-49A0A0A0MS15 119 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 RECKO95980 971 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 RIGQ13278 110 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 C1RLQ9NZP8 487 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 EIF3GO75821 320 aaKnown RBP eCLIP14.33□□□□□ -0.12
RGP1-201ENST00000378078 MDKP21741 143 aaPredicted RBP14.33□□□□□ -0.12
RGP1-201ENST00000378078 ATP5J2P56134 94 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 RAXQ9Y2V3 346 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 TDRD6O60522 2096 aaKnown RBP14.33□□□□□ -0.12
RGP1-201ENST00000378078 ITGB4P16144 1822 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 IGHV3OR16-13A0A075B7E8 117 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 IGHV3-74A0A0B4J1X5 117 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 SRD5A2P31213 254 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 DNLZQ5SXM8 178 aa14.33□□□□□ -0.12
RGP1-201ENST00000378078 RASL10BQ96S79 203 aa14.32□□□□□ -0.12
RGP1-201ENST00000378078 GPR35Q9HC97 309 aa14.32□□□□□ -0.12
RGP1-201ENST00000378078 MMP26Q9NRE1 261 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms