RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 RSBN1Q5VWQ0 802 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-202ENST00000374426 ELP2Q6IA86 826 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 FOXRED2Q8IWF2 684 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 CNIH3Q8TBE1 160 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 PLPPR1Q8TBJ4 325 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 MRGPRDQ8TDS7 321 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 RNFT2Q96EX2 444 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 NR1H4Q96RI1 486 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-202ENST00000374426 OAZ3Q9UMX2 235 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 TRAV39A0A0B4J263 110 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 A0A1W2PPE3 182 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 J3QLW9 94 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 HSD17B6O14756 317 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 SULT1B1O43704 296 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 RPLP1P05386 114 aaKnown RBP10.83□□□□□ -0.68
CXCL12-202ENST00000374426 ZNF19P17023 458 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 GP2P55259 537 aaKnown RBP10.83□□□□□ -0.68
CXCL12-202ENST00000374426 RAB25P57735 213 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 ALKBH1Q13686 389 aaKnown RBP10.83□□□□□ -0.68
CXCL12-202ENST00000374426 ZSCAN26Q16670 478 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 DEFB136Q30KP8 78 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 ZNF691Q5VV52 312 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 TEX38Q6PEX7 206 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 SLC16A12Q6ZSM3 486 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 LCNL1Q6ZST4 164 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 PARP16Q8N5Y8 322 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 OR10X1Q8NGY0 326 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 TRUB1Q8WWH5 349 aaKnown RBP10.83□□□□□ -0.68
CXCL12-202ENST00000374426 C4orf36Q96KX1 117 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 BARHL1Q9BZE3 327 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 DCLRE1BQ9H816 532 aa10.83□□□□□ -0.68
CXCL12-202ENST00000374426 SACSQ9NZJ4 4579 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 TENM2Q9NT68 2774 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 IGHV3-72A0A0B4J1Y9 119 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 IGHV1-3A0A0C4DH29 117 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 AP4M1O00189 453 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 GPR12P47775 334 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 REG1BP48304 166 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 ZNF816Q0VGE8 651 aaPredicted RBP10.82□□□□□ -0.68
CXCL12-202ENST00000374426 PNLIPRP3Q17RR3 467 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 PIGYQ3MUY2 71 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 SLC25A30Q5SVS4 291 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 LPCAT4Q643R3 524 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 TGIF2LXQ8IUE1 241 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 SERPINA12Q8IW75 414 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 Q8N6K4 173 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 ACBD7Q8N6N7 88 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 PXT1Q8NFP0 134 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 OR10A7Q8NGE5 316 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 OR5D14Q8NGL3 314 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
CXCL12-202ENST00000374426 PRR25Q96S07 402 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 ABCG5Q9H222 651 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 IMPAD1Q9NX62 359 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 ZNF581Q9P0T4 197 aa10.82□□□□□ -0.68
CXCL12-202ENST00000374426 NCBP2LA6PVI3 153 aaKnown RBP10.81□□□□□ -0.68
CXCL12-202ENST00000374426 CCRL2O00421 344 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 ZFPL1O95159 310 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 FCGR1AP12314 374 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 KCNJ3P48549 501 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 SNRPGP62308 76 aaKnown RBP10.81□□□□□ -0.68
CXCL12-202ENST00000374426 IL13RA2Q14627 380 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 KIR2DS1Q14954 304 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 MOB3BQ86TA1 216 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 IZUMO1Q8IYV9 350 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 RNF152Q8N8N0 203 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 Q8N9W7 124 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 Q8NFD4 153 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 OR5M8Q8NGP6 311 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 OR10K1Q8NGX5 313 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 OR8U1Q8NH10 309 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 CENPNQ96H22 339 aaPredicted RBP10.81□□□□□ -0.68
CXCL12-202ENST00000374426 ISG20L2Q9H9L3 353 aaKnown RBP10.81□□□□□ -0.68
CXCL12-202ENST00000374426 LIN7CQ9NUP9 197 aaKnown RBP10.81□□□□□ -0.68
CXCL12-202ENST00000374426 SCOCQ9UIL1 159 aa10.81□□□□□ -0.68
CXCL12-202ENST00000374426 EXOGQ9Y2C4 368 aaKnown RBP10.81□□□□□ -0.68
CXCL12-202ENST00000374426 SAC3D1A6NKF1 404 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 E9PI62 339 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 GABRPO00591 440 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 GAPDHP04406 335 aaKnown RBP10.8□□□□□ -0.68
CXCL12-202ENST00000374426 CDX1P47902 265 aaPredicted RBP10.8□□□□□ -0.68
CXCL12-202ENST00000374426 FOXE3Q13461 319 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 GPR50Q13585 617 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 CXorf66Q5JRM2 361 aaPredicted RBP10.8□□□□□ -0.68
CXCL12-202ENST00000374426 C9orf66Q5T8R8 295 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 ZNF529Q6P280 563 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 LHFPL3Q86UP9 236 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 TMEM104Q8NE00 496 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 OR51A2Q8NGJ7 313 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 TNFAIP8L1Q8WVP5 186 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 LGALS12Q96DT0 336 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 ASCL2Q99929 193 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 PDCD1LG2Q9BQ51 273 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 ALG8Q9BVK2 526 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 DPCDQ9BVM2 203 aaPredicted RBP10.8□□□□□ -0.68
CXCL12-202ENST00000374426 PLSCR3Q9NRY6 295 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 DHDHQ9UQ10 334 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 SORL1Q92673 2214 aa10.8□□□□□ -0.68
CXCL12-202ENST00000374426 TMEM212A6NML5 194 aa10.79□□□□□ -0.68
CXCL12-202ENST00000374426 SEC14L6B5MCN3 397 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms