RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SCCPDHQ8NBX0 429 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 DMBX1Q8NFW5 382 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 SLC25A40Q8TBP6 338 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 TNFSF12O43508 249 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 RND3P61587 244 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 ZNF695Q8IW36 515 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 SELENOHQ8IZQ5 122 aaKnown RBP15.93■□□□□ 0.14
USP49-202ENST00000373010 WNT2BQ93097 391 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 SAT2Q96F10 170 aaPredicted RBP15.93■□□□□ 0.14
USP49-202ENST00000373010 RIMS4Q9H426 269 aaPredicted RBP15.93■□□□□ 0.14
USP49-202ENST00000373010 GLRX2Q9NS18 164 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 CNOT1A5YKK6 2376 aaKnown RBP15.92■□□□□ 0.14
USP49-202ENST00000373010 GPR137BO60478 399 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 AGFG2O95081 481 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 SULT1A2P50226 295 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 PJVKQ0ZLH3 352 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 MRPL49Q13405 166 aaKnown RBP15.92■□□□□ 0.14
USP49-202ENST00000373010 VWA1Q6PCB0 445 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 LILRB1Q8NHL6 650 aaPredicted RBP15.92■□□□□ 0.14
USP49-202ENST00000373010 GTF3AQ92664 365 aaKnown RBP15.92■□□□□ 0.14
USP49-202ENST00000373010 TMEM56Q96MV1 263 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 TMEM56-RWDD3S4R434 201 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 ZFHX4Q86UP3 3567 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 PRR14LQ5THK1 2151 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 SIRPB1O00241 398 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 CTXN2P0C2S0 81 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 ID4P47928 161 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 SRPXP78539 464 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 NHLH2Q02577 135 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 GUSBP1Q15486 140 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 IGFL2Q6UWQ7 119 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 Q6ZT83 130 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 C9orf106Q8NAJ2 232 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 OR1J1Q8NGS3 322 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 ADAT1Q9BUB4 502 aaKnown RBP15.92■□□□□ 0.14
USP49-202ENST00000373010 PARP12Q9H0J9 701 aaKnown RBP15.92■□□□□ 0.14
USP49-202ENST00000373010 TREM1Q9NP99 234 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 FAM96BQ9Y3D0 163 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 POMT1Q9Y6A1 747 aa15.92■□□□□ 0.14
USP49-202ENST00000373010 TRBV6-6A0A0A6YYG2 114 aa15.91■□□□□ 0.14
USP49-202ENST00000373010 H0YL77 283 aa15.91■□□□□ 0.14
USP49-202ENST00000373010 ATG12O94817 140 aa15.91■□□□□ 0.14
USP49-202ENST00000373010 SELEP16581 610 aa15.91■□□□□ 0.14
USP49-202ENST00000373010 ATF4P18848 351 aaPredicted RBP15.91■□□□□ 0.14
USP49-202ENST00000373010 HLA-DRB3P79483 266 aa15.91■□□□□ 0.14
USP49-202ENST00000373010 DEFB109BQ30KR1 87 aa15.91■□□□□ 0.14
USP49-202ENST00000373010 KIRREL1Q96J84 757 aa15.91■□□□□ 0.14
USP49-202ENST00000373010 DMXL1Q9Y485 3027 aa15.91■□□□□ 0.14
USP49-202ENST00000373010 LRP5LA4QPB2 252 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 DNASE2O00115 360 aaPredicted RBP15.9■□□□□ 0.14
USP49-202ENST00000373010 CDIPTO14735 213 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 KIR2DL2P43627 348 aaPredicted RBP15.9■□□□□ 0.14
USP49-202ENST00000373010 P2RY1P47900 373 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 PSG7Q13046 419 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 ZNF880Q6PDB4 577 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 IL34Q6ZMJ4 242 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 UBAC2Q8NBM4 344 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 IL1F10Q8WWZ1 152 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 TSNAXQ99598 290 aaKnown RBP15.9■□□□□ 0.14
USP49-202ENST00000373010 NKX6-2Q9C056 277 aaPredicted RBP15.9■□□□□ 0.14
USP49-202ENST00000373010 ZFP57Q9NU63 452 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 ZNF318Q5VUA4 2279 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 TRAV17A0A0B4J275 112 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 FAM74A7A6NL05 159 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 NUDT19A8MXV4 375 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 J3QW42 95 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 ADAM20O43506 726 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 CDS2O95674 445 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 MPV17P39210 176 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 ASCL1P50553 236 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 UCP2P55851 309 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 ZNF154Q13106 437 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 GUCA2BQ16661 112 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 FAM74A3Q4VXF1 159 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 FAM76BQ5HYJ3 339 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 GPR157Q5UAW9 335 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 ZNF324BQ6AW86 544 aaPredicted RBP15.9■□□□□ 0.14
USP49-202ENST00000373010 OR10J5Q8NHC4 309 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 PLPPR1Q8TBJ4 325 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 IFT22Q9H7X7 185 aa15.9■□□□□ 0.14
USP49-202ENST00000373010 OR2H2O95918 312 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 INO80CQ6PI98 192 aaPredicted RBP15.89■□□□□ 0.13
USP49-202ENST00000373010 UBALD1Q8TB05 177 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 RHOFQ9HBH0 211 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 OR1A1Q9P1Q5 309 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 PTPRBP23467 1997 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 CFAP47Q6ZTR5 3102 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 AQP7O14520 342 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 AGPAT2O15120 278 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 PGLYRP1O75594 196 aaPredicted RBP15.89■□□□□ 0.13
USP49-202ENST00000373010 GRPP07492 148 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 RAC2P15153 192 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 ERVK11-1P61568 191 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 POLR2GP62487 172 aaKnown RBP eCLIP15.89■□□□□ 0.13
USP49-202ENST00000373010 FOXF2Q12947 444 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 Q6ZRG5 221 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 H1FOOQ8IZA3 346 aaPredicted RBP15.89■□□□□ 0.13
USP49-202ENST00000373010 MAGT1Q9H0U3 335 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 ARV1Q9H2C2 271 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 ERRFI1Q9UJM3 462 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms