RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 DHRS3O75911 302 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 SNAPINO95295 136 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 MPIG6BO95866 241 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 SERPINA5P05154 406 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 AMY2BP19961 511 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 PTGFRP43088 359 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 ZNF121P58317 390 aaPredicted RBP8.83□□□□□ -1
COL5A1-202ENST00000371820 SELENOVP59797 346 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 HIST1H3AP68431 136 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 HGFACQ04756 655 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 FMODQ06828 376 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 LOXL1Q08397 574 aaPredicted RBP8.83□□□□□ -1
COL5A1-202ENST00000371820 NKPD1Q17RQ9 610 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 MST1LQ2TV78 715 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 MOGAT2Q3SYC2 334 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 CHRFAM7AQ494W8 412 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 SMUG1Q53HV7 270 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 HIST2H3PS2Q5TEC6 136 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 CORO6Q6QEF8 472 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 HIST2H3AQ71DI3 136 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 KCTD9Q7L273 389 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 MYPOPQ86VE0 399 aaPredicted RBP8.83□□□□□ -1
COL5A1-202ENST00000371820 SGPP2Q8IWX5 399 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 SKA3Q8IX90 412 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 ZNF525Q8N782 197 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 OR5AP2Q8NGF4 316 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 OR14K1Q8NGZ2 314 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 C10orf105Q8TEF2 133 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 DCUN1D4Q92564 292 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 SEC22AQ96IW7 307 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 FOXN4Q96NZ1 517 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 AQP10Q96PS8 301 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 GAL3ST1Q99999 423 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 SYT3Q9BQG1 590 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 PIMREGQ9BSJ6 248 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 MS4A5Q9H3V2 200 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 RGCCQ9H4X1 137 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 PLEKHA2Q9HB19 425 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 CDH20Q9HBT6 801 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 GPR84Q9NQS5 396 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 HSF4Q9ULV5 492 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 LHFPL6Q9Y693 200 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 HEATR1Q9H583 2144 aaKnown RBP8.83□□□□□ -1
COL5A1-202ENST00000371820 C13orf42A0A1B0GVH6 325 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 H3BSH0 61 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 H7C2Y5 167 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 MFNGO00587 321 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 JTBO76095 146 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 IGLV3-1P01715 115 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 APOC3P02656 99 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 PMP2P02689 132 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 GNB3P16520 340 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 RBMXP38159 391 aaKnown RBP8.82□□□□□ -1
COL5A1-202ENST00000371820 LUMP51884 338 aaPredicted RBP8.82□□□□□ -1
COL5A1-202ENST00000371820 ATP1B3P54709 279 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 PCBD1P61457 104 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 MRPS34P82930 218 aaKnown RBP8.82□□□□□ -1
COL5A1-202ENST00000371820 FLI1Q01543 452 aaPredicted RBP8.82□□□□□ -1
COL5A1-202ENST00000371820 CNN3Q15417 329 aaKnown RBP8.82□□□□□ -1
COL5A1-202ENST00000371820 KISS1Q15726 138 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 SGCAQ16586 387 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 TBC1D28Q2M2D7 210 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 OR10K2Q6IF99 312 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 UNQ6126/PRO20091Q6UXV3 157 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 LHFPL1Q86WI0 220 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 WDFY1Q8IWB7 410 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 CSNK2A3Q8NEV1 391 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 OR4S1Q8NGB4 309 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 OR8B12Q8NGG6 310 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 MARCH1Q8TCQ1 289 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 MRPL24Q96A35 216 aaKnown RBP8.82□□□□□ -1
COL5A1-202ENST00000371820 ZNF75AQ96N20 296 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 NKX6-2Q9C056 277 aaPredicted RBP8.82□□□□□ -1
COL5A1-202ENST00000371820 METTL9Q9H1A3 318 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 MMP26Q9NRE1 261 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 GPR160Q9UJ42 338 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 PLCE1Q9P212 2302 aa8.82□□□□□ -1
COL5A1-202ENST00000371820 TMEM218A2RU14 115 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 SYNGR3O43761 229 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 SSX5O60225 188 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 IFNA2P01563 188 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 CSTBP04080 98 aaKnown RBP8.81□□□□□ -1
COL5A1-202ENST00000371820 GAPDHP04406 335 aaKnown RBP8.81□□□□□ -1
COL5A1-202ENST00000371820 CSN2P05814 226 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 CTSDP07339 412 aaPredicted RBP8.81□□□□□ -1
COL5A1-202ENST00000371820 USF1P22415 310 aaPredicted RBP8.81□□□□□ -1
COL5A1-202ENST00000371820 DTYMKP23919 212 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 APLNRP35414 380 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 SCRN3Q0VDG4 424 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 MICBQ29980 383 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 PXDC1Q5TGL8 231 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 FAM27BQ5VT28 67 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 C1orf174Q8IYL3 243 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 OR5AS1Q8N127 324 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 CLRN3Q8NCR9 226 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 OR10S1Q8NGN2 331 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 CASTOR1Q8WTX7 329 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 NUDCD2Q8WVJ2 157 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 SEC11CQ9BY50 192 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 BCL2L14Q9BZR8 327 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms