RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 PARP12Q9H0J9 701 aaKnown RBP20.22■□□□□ 0.83
USP25-203ENST00000351097 GLRX2Q9NS18 164 aa20.22■□□□□ 0.83
USP25-203ENST00000351097 RCL1Q9Y2P8 373 aaKnown RBP20.22■□□□□ 0.83
USP25-203ENST00000351097 KLF2Q9Y5W3 355 aaPredicted RBP20.22■□□□□ 0.83
USP25-203ENST00000351097 KLK10O43240 276 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 BCL3P20749 454 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 IGFL3Q6UXB1 125 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 DMBX1Q8NFW5 382 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 LUZP4Q9P127 313 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 PLP2Q04941 152 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 PRDX4Q13162 271 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 SRSF7Q16629 238 aaKnown RBP eCLIP20.21■□□□□ 0.83
USP25-203ENST00000351097 MIDNQ504T8 468 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 DPPA2Q7Z7J5 298 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 SAXO1Q8IYX7 474 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 LINC00518Q8N0U6 118 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 SLAMF9Q96A28 289 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 KPTNQ9Y664 436 aa20.21■□□□□ 0.83
USP25-203ENST00000351097 GNMTQ14749 295 aa20.2■□□□□ 0.82
USP25-203ENST00000351097 APOBEC3DQ96AK3 386 aaPredicted RBP20.2■□□□□ 0.82
USP25-203ENST00000351097 SARAFQ96BY9 339 aa20.2■□□□□ 0.82
USP25-203ENST00000351097 LHX6Q9UPM6 363 aa20.2■□□□□ 0.82
USP25-203ENST00000351097 CDS2O95674 445 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 SNCAP37840 140 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 FGF12P61328 243 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 GUSBP1Q15486 140 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 HMGN3Q15651 99 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 FAM214BQ7L5A3 538 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 AKR1E2Q96JD6 320 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 TMEM222Q9H0R3 208 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 MED12LQ86YW9 2145 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 TRDCB7Z8K6 153 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 PRSS44E7EML9 344 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 NGFP01138 241 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 GNRHRP30968 328 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 HAAOP46952 286 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 CAMLGP49069 296 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 RAB5CP51148 216 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 RAB13P51153 203 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 UCP2P55851 309 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 ZNF616Q08AN1 781 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 PEA15Q15121 130 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 HPSE2Q8WWQ2 592 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 FGF23Q9GZV9 251 aaPredicted RBP20.19■□□□□ 0.82
USP25-203ENST00000351097 Q9N2K0 584 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 CACFD1Q9UGQ2 172 aa20.19■□□□□ 0.82
USP25-203ENST00000351097 TK1P04183 234 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 NHLH2Q02577 135 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 MRPL21Q7Z2W9 205 aaKnown RBP20.18■□□□□ 0.82
USP25-203ENST00000351097 ZDHHC23Q8IYP9 409 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 RXFP4Q8TDU9 374 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 SECTM1Q8WVN6 248 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 STRAPQ9Y3F4 350 aaKnown RBP20.18■□□□□ 0.82
USP25-203ENST00000351097 PRRC2CQ9Y520 2896 aaKnown RBP20.18■□□□□ 0.82
USP25-203ENST00000351097 NAPSAO96009 420 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 PPT1P50897 306 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 GPM6AP51674 278 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 CEACAM21Q3KPI0 293 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 AVPI1Q5T686 147 aa20.18■□□□□ 0.82
USP25-203ENST00000351097 KCNJ3P48549 501 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 RND3P61587 244 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 TBC1D26Q86UD7 250 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 MDP1Q86V88 176 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 NANOS1Q8WY41 292 aaKnown RBP20.17■□□□□ 0.82
USP25-203ENST00000351097 BOD1Q96IK1 185 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 TMEM56Q96MV1 263 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 SMCO4Q9NRQ5 59 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 C19orf12Q9NSK7 152 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 CRIM1Q9NZV1 1036 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 UBE2J1Q9Y385 318 aaPredicted RBP20.17■□□□□ 0.82
USP25-203ENST00000351097 TMEM56-RWDD3S4R434 201 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 MEX3AA1L020 520 aaKnown RBP20.17■□□□□ 0.82
USP25-203ENST00000351097 NKX2-6A6NCS4 301 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 CRYBA1P05813 215 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 IGHV1-2P23083 117 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 ZNF565Q8N9K5 539 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 C9orf106Q8NAJ2 232 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 USB1Q9BQ65 265 aaKnown RBP20.17■□□□□ 0.82
USP25-203ENST00000351097 SH3BGRL3Q9H299 93 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 C11orf1Q9H5F2 150 aa20.17■□□□□ 0.82
USP25-203ENST00000351097 DOCK7Q96N67 2140 aa20.16■□□□□ 0.82
USP25-203ENST00000351097 APLNRP35414 380 aa20.16■□□□□ 0.82
USP25-203ENST00000351097 WNT5AP41221 380 aa20.16■□□□□ 0.82
USP25-203ENST00000351097 EWSR1Q01844 656 aaKnown RBP eCLIP20.16■□□□□ 0.82
USP25-203ENST00000351097 GUK1Q16774 197 aa20.16■□□□□ 0.82
USP25-203ENST00000351097 MPV17LQ2QL34 196 aa20.16■□□□□ 0.82
USP25-203ENST00000351097 SPIN3Q5JUX0 258 aa20.16■□□□□ 0.82
USP25-203ENST00000351097 ZNF695Q8IW36 515 aa20.16■□□□□ 0.82
USP25-203ENST00000351097 SPIN2AQ99865 258 aa20.16■□□□□ 0.82
USP25-203ENST00000351097 SPIN2BQ9BPZ2 258 aa20.16■□□□□ 0.82
USP25-203ENST00000351097 PRH1P02810 166 aa20.15■□□□□ 0.82
USP25-203ENST00000351097 OR2C3Q8N628 320 aa20.15■□□□□ 0.82
USP25-203ENST00000351097 HSD17B11Q8NBQ5 300 aa20.15■□□□□ 0.82
USP25-203ENST00000351097 SCRT1Q9BWW7 348 aa20.15■□□□□ 0.82
USP25-203ENST00000351097 ZNF732B4DXR9 585 aa20.15■□□□□ 0.82
USP25-203ENST00000351097 SCTP09683 121 aa20.15■□□□□ 0.82
USP25-203ENST00000351097 NKX2-1P43699 371 aaPredicted RBP20.15■□□□□ 0.82
USP25-203ENST00000351097 HOXA1P49639 335 aaPredicted RBP20.15■□□□□ 0.82
USP25-203ENST00000351097 FHITP49789 147 aa20.15■□□□□ 0.82
USP25-203ENST00000351097 Q6ZS92 163 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms