RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 KANTRA0A1W2PQU2 76 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 C9orf170A2RU37 121 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 A8MXK9 166 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 MLNRO43193 412 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 TSPAN9O75954 239 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 OR2F2O95006 317 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 MPIG6BO95866 241 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 GLAP06280 429 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 GSTP1P09211 210 aaKnown RBP8.03□□□□□ -1.12
C11orf54-201ENST00000331239 HLA-GP17693 338 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 PMELP40967 661 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 OR2F1Q13607 317 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 C11orf87Q6NUJ2 197 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 GLIPR1L1Q6UWM5 242 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 HSD17B13Q7Z5P4 300 aaPredicted RBP8.03□□□□□ -1.12
C11orf54-201ENST00000331239 ST8SIA4Q92187 359 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 MEGF10Q96KG7 1140 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 SPACA5Q96QH8 159 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 GPER1Q99527 375 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 SYT3Q9BQG1 590 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 NICN1Q9BSH3 213 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 KCNK7Q9Y2U2 307 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 OR2AT4A6NND4 320 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 BCL2L11O43521 198 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 IGHV1-46P01743 117 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 FGF2P09038 288 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 PRKACAP17612 351 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 VAMP1P23763 118 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 IL13RA1P78552 427 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 LRRC37A5PQ49AS3 106 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 VHLLQ6RSH7 139 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 RTN4RL2Q86UN3 420 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 LRP11Q86VZ4 500 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 TMEM104Q8NE00 496 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 BVESQ8NE79 360 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 OR11L1Q8NGX0 322 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 PPP1R1CQ8WVI7 109 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 C1orf147Q96MC9 270 aaPredicted RBP8.03□□□□□ -1.12
C11orf54-201ENST00000331239 TMEM59Q9BXS4 323 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 SLC25A32Q9H2D1 315 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 PLEKHF2Q9H8W4 249 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 DYNLRB1Q9NP97 96 aa8.03□□□□□ -1.12
C11orf54-201ENST00000331239 USP9XQ93008 2570 aaPredicted RBP8.03□□□□□ -1.12
C11orf54-201ENST00000331239 FLNBO75369 2602 aaKnown RBP8.02□□□□□ -1.12
C11orf54-201ENST00000331239 A0A0A6YYD4 124 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 LRRC30A6NM36 301 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 CDC14BO60729 498 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 HIST1H1DP16402 221 aaKnown RBP8.02□□□□□ -1.12
C11orf54-201ENST00000331239 OR3A4PP47883 348 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 TAS2R31P59538 309 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 TNFAIP6P98066 277 aaPredicted RBP8.02□□□□□ -1.12
C11orf54-201ENST00000331239 ALKBH6Q3KRA9 238 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 ACTBL2Q562R1 376 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 CRIP3Q6Q6R5 217 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 RNF144BQ7Z419 303 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 C1orf87Q8N0U7 546 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 OR4K15Q8NH41 348 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 RAB3CQ96E17 227 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 IFT22Q9H7X7 185 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 C12orf4Q9NQ89 552 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 ANAPC10Q9UM13 185 aa8.02□□□□□ -1.12
C11orf54-201ENST00000331239 FAM230AA0A1W2PPH8 454 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 OVOL3O00110 214 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 DUS4LO95620 317 aaKnown RBP8.02□□□□□ -1.13
C11orf54-201ENST00000331239 PLAUP00749 431 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 PMP2P02689 132 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 GPM6AP51674 278 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 ERVK11-1P61568 191 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 IL13RA2Q14627 380 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 ATXN7L3Q14CW9 347 aaPredicted RBP8.02□□□□□ -1.13
C11orf54-201ENST00000331239 ACOT7LQ6ZUV0 252 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 EIF4E3Q8N5X7 224 aaKnown RBP8.02□□□□□ -1.13
C11orf54-201ENST00000331239 POC1AQ8NBT0 407 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 OR2Z1Q8NG97 314 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 OR51T1Q8NGJ9 327 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 CASTOR1Q8WTX7 329 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 SEC22AQ96IW7 307 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 VRK1Q99986 396 aaPredicted RBP8.02□□□□□ -1.13
C11orf54-201ENST00000331239 URM1Q9BTM9 101 aaKnown RBP8.02□□□□□ -1.13
C11orf54-201ENST00000331239 TM2D1Q9BX74 207 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 BARX1Q9HBU1 254 aaPredicted RBP8.02□□□□□ -1.13
C11orf54-201ENST00000331239 DECR2Q9NUI1 292 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 TENM4Q6N022 2769 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 TANC2Q9HCD6 1990 aa8.02□□□□□ -1.13
C11orf54-201ENST00000331239 IGKV1-27A0A075B6S5 117 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 RNF222A6NCQ9 220 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 A6NJY4 79 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 TRAPPC2LH3BP13 241 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 TEX46H3BTG2 121 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 LILRA1O75019 489 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 PGA5P0DJD9 388 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 TMEM225BP0DP42 221 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 AKR1C4P17516 323 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 LUMP51884 338 aaPredicted RBP8.01□□□□□ -1.13
C11orf54-201ENST00000331239 POLR2GP62487 172 aaKnown RBP eCLIP8.01□□□□□ -1.13
C11orf54-201ENST00000331239 SNTB1Q13884 538 aaKnown RBP8.01□□□□□ -1.13
C11orf54-201ENST00000331239 PNLIPRP3Q17RR3 467 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 TUSC1Q2TAM9 212 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 PLAC9Q5JTB6 97 aa8.01□□□□□ -1.13
C11orf54-201ENST00000331239 SPIN3Q5JUX0 258 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms