RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ZNF468Q5VIY5 522 aaPredicted RBP14.18□□□□□ -0.14
GPC1-201ENST00000264039 MRPL30Q8TCC3 161 aaKnown RBP14.18□□□□□ -0.14
GPC1-201ENST00000264039 CCL28Q9NRJ3 127 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 SELENOKQ9Y6D0 94 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 CXorf51AA0A1B0GTR3 108 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 PPYP01298 95 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 CARFQ8N187 725 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 CLDND2Q8NHS1 167 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 ZNF519Q8TB69 540 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 HLA-CQ95604 372 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 FAM157AC9JC47 383 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 SLC35B1P78383 322 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 SRPXP78539 464 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 TMEM171Q8WVE6 324 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 RPP25Q9BUL9 199 aaKnown RBP14.17□□□□□ -0.14
GPC1-201ENST00000264039 CACNG5Q9UF02 275 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 VAX2Q9UIW0 290 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 A0A1B0GWJ7 208 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 TCRBV21S2A2A0A5A6 115 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 PAGE4O60829 102 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 TMEM256Q8N2U0 113 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 DIRC2Q96SL1 478 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 VSIRQ9H7M9 311 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 DENND4CQ5VZ89 1909 aa14.17□□□□□ -0.14
GPC1-201ENST00000264039 C5orf63A6NC05 138 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 CCKARP32238 428 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 THBS3P49746 956 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 THEM4Q5T1C6 240 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 NEU1Q99519 415 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 SRD5A3Q9H8P0 318 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 DNAH14Q0VDD8 3507 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 DTYMKP23919 212 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 FUT7Q11130 342 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 GJC3Q8NFK1 279 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 PTPMT1Q8WUK0 201 aaPredicted RBP14.16□□□□□ -0.14
GPC1-201ENST00000264039 ELSPBP1Q96BH3 223 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 IMMP2LQ96T52 175 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 RALGAPA1Q6GYQ0 2036 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 MGST1P10620 155 aaKnown RBP14.16□□□□□ -0.14
GPC1-201ENST00000264039 SELEP16581 610 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 CHRNB4P30926 498 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 RAB7AP51149 207 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 NUBP1P53384 320 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 TPPP2P59282 170 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 TAS2R30P59541 319 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 ZNF506Q5JVG8 444 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 ZNF439Q8NDP4 499 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 PHOSPHO2Q8TCD6 241 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 SMDT1Q9H4I9 107 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 GVINP1Q7Z2Y8 2422 aa14.16□□□□□ -0.14
GPC1-201ENST00000264039 DXOO77932 396 aaKnown RBP14.15□□□□□ -0.14
GPC1-201ENST00000264039 DEFA4P12838 97 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 AMTP48728 403 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 SUCLG1P53597 346 aaKnown RBP14.15□□□□□ -0.14
GPC1-201ENST00000264039 C17orf67Q0P5P2 114 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 CNN3Q15417 329 aaKnown RBP14.15□□□□□ -0.14
GPC1-201ENST00000264039 COL5A1-AS1Q5SY13 56 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 SGMS2Q8NHU3 365 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 KLHDC7BQ96G42 594 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 ADGRG7Q96K78 797 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 HINT2Q9BX68 163 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 A0A087WWC5 75 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 TCN2P20062 427 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 GNB2P62879 340 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 HLA-BQ31612 363 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 TCF23Q7RTU1 214 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 OSR2Q8N2R0 312 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 GLRX2Q9NS18 164 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 TUBD1Q9UJT1 453 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 LHFPL6Q9Y693 200 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 ROS1P08922 2347 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 IGKV1-9A0A0C4DH69 117 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 A0A1B0GU03 582 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 SIRPB1O00241 398 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 FASLGP48023 281 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 TMEM196Q5HYL7 178 aa14.15□□□□□ -0.14
GPC1-201ENST00000264039 MS4A18H0YCH9 400 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 M0QZK8 103 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 GGCTO75223 188 aaKnown RBP14.14□□□□□ -0.15
GPC1-201ENST00000264039 PITX3O75364 302 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 HNRNPA1P09651 372 aaKnown RBP eCLIP14.14□□□□□ -0.15
GPC1-201ENST00000264039 MS4A18Q3C1V0 323 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 TECTBQ96PL2 329 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 DUSP15Q9H1R2 295 aaPredicted RBP14.14□□□□□ -0.15
GPC1-201ENST00000264039 MOB1AQ9H8S9 216 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 ZNF586Q9NXT0 402 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 RNF150Q9ULK6 438 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 KIR2DS5A0A0G2JLQ3 304 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 A0A0G2JNG1 304 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 TRBV11-1A0A0K0K1C0 115 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 LOC102723971A0A1B0GUV8 181 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 CLEC18AA5D8T8 446 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 KIR2DS3K7RE56 304 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 NRASP01111 189 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 CRISP2P16562 243 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 TDGF1P3P51864 188 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 GRB2P62993 217 aaKnown RBP14.14□□□□□ -0.15
GPC1-201ENST00000264039 KIR2DS5Q14953 304 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 PRSS8Q16651 343 aa14.14□□□□□ -0.15
GPC1-201ENST00000264039 SPSB3Q6PJ21 355 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms