RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TMEM140Q9NV12 185 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 PRNDQ9UKY0 176 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 OR51B2Q9Y5P1 312 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 HPXP02790 462 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 FTH1P19P0C7X4 201 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 COL8A1P27658 744 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 ERVFRD-1P60508 538 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 MTFP1Q9UDX5 166 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 TMEFF2Q9UIK5 374 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-201ENST00000225964 AKAP11Q9UKA4 1901 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 NUP205Q92621 2012 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 LSM6P62312 80 aaKnown RBP11.62□□□□□ -0.55
COL1A1-201ENST00000225964 IQCJQ1A5X6 159 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 ZNF658BQ4V348 819 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-201ENST00000225964 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 WDR73Q6P4I2 378 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 LINC00299Q6ZSB3 139 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 DTD1Q8TEA8 209 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 DYRK2Q92630 601 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 SOCS1O15524 211 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 CRYBB2P43320 205 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 HLA-DRB3P79483 266 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 PRNTQ86SH4 94 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 ALG14Q96F25 216 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 SLC52A3Q9NQ40 469 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 SMAD7O15105 426 aaKnown RBP11.62□□□□□ -0.55
COL1A1-201ENST00000225964 CEBPDP49716 269 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-201ENST00000225964 C1QL3Q5VWW1 255 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 TEX261Q6UWH6 196 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 AKIP1Q9NQ31 210 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 TMSB15BA0A087X1C1 80 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 H3BVH4 76 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 MELTFP08582 738 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 GZMHP20718 246 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 UQCC3Q6UW78 93 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 FAM210BQ96KR6 192 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 TMEM38BQ9NVV0 291 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 MRM2Q9UI43 246 aaKnown RBP11.61□□□□□ -0.55
COL1A1-201ENST00000225964 IGKV3D-15A0A087WSY6 115 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 TRAV39A0A0B4J263 110 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 FAM181BA6NEQ2 426 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 IGKV3-15P01624 115 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 PPP1CCP36873 323 aaKnown RBP11.61□□□□□ -0.55
COL1A1-201ENST00000225964 CDC20Q12834 499 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 FBXW9Q5XUX1 488 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 MYOZ3Q8TDC0 251 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 SNRNP40Q96DI7 357 aaKnown RBP11.61□□□□□ -0.55
COL1A1-201ENST00000225964 TRIP11Q15643 1979 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 MFSD2BA6NFX1 497 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 C19orf57Q0VDD7 668 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 SLC25A42Q86VD7 318 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 WDR34Q96EX3 536 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 GPX7Q96SL4 187 aaPredicted RBP11.61□□□□□ -0.55
COL1A1-201ENST00000225964 GHITMQ9H3K2 345 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 FBXL17Q9UF56 701 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 STRCQ7RTU9 1775 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 MAP1LC3CQ9BXW4 147 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 TOLLIPQ9H0E2 274 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 CHST1O43916 411 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 PF4V1P10720 104 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 DLX1P56177 255 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 IL24Q13007 206 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 CLPPQ16740 277 aaPredicted RBP11.61□□□□□ -0.55
COL1A1-201ENST00000225964 RNF122Q9H9V4 155 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 CCL28Q9NRJ3 127 aa11.61□□□□□ -0.55
COL1A1-201ENST00000225964 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
COL1A1-201ENST00000225964 CLDN18P56856 261 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 TMEM183BQ1AE95 376 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 ATG4DQ86TL0 474 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-201ENST00000225964 C17orf47Q8NEP4 570 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 DIRC2Q96SL1 478 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 CCL19Q99731 98 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 HIGD1AQ9Y241 93 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 MYO5AQ9Y4I1 1855 aaKnown RBP11.6□□□□□ -0.55
COL1A1-201ENST00000225964 CDC42EP2O14613 210 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 SYNGR2O43760 224 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 SRSF10O75494 262 aaKnown RBP11.6□□□□□ -0.55
COL1A1-201ENST00000225964 CCL8P80075 99 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 SLC35B3Q9H1N7 401 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 C11orf94C9JXX5 98 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 DAOP14920 347 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 ZNF714Q96N38 554 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 OR2J1Q9GZK6 312 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 SS18L1O75177 396 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-201ENST00000225964 MPC2O95563 127 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 TWIST1Q15672 202 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 C16orf92Q96LL3 132 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 GFRA3O60609 400 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 CTSDP07339 412 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-201ENST00000225964 RPL31P62899 125 aaKnown RBP11.6□□□□□ -0.55
COL1A1-201ENST00000225964 GBGT1Q8N5D6 347 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 WIPI2Q9Y4P8 454 aa11.6□□□□□ -0.55
COL1A1-201ENST00000225964 LOC389332A0A1B0GUA5 103 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 SPINT1O43278 529 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 SYNGR1O43759 233 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 C19orf54Q5BKX5 351 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 C12orf57Q99622 126 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 FRRS1LQ9P0K9 344 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 ANXA10Q9UJ72 324 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms