RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr485A0A140LJF5 317 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1223A0A1L1SU13 311 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 PomcP01193 235 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 GzmfP08883 248 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Oprm1P42866 398 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Nhlrc4Q3UP44 136 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 PiglQ5SX19 252 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 CytipQ91VY6 359 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Mpped2Q9CZJ0 294 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Dgat2l6A2ADU8 337 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm13769A2ATW2 309 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm14403A2BFU4 402 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Cisd3B1AR13 137 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr152G3X9L8 316 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Rasl2-9Q61820 216 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr851Q7TRG0 312 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Mogat2Q80W94 334 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 ArsjQ8BM89 598 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr837Q8VFJ4 312 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Egln1Q91YE3 400 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Pdzd11Q9CZG9 140 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Alkbh7Q9D6Z0 221 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Plscr5J3QM92 274 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 P01795 144 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Cox5aP12787 146 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 RelP15307 587 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Uck1P52623 277 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Tex30Q3TUU5 225 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 GcdhQ60759 438 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1111Q7TR55 312 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Lrrtm1Q8K377 522 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Vmn1r211Q8R266 298 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Rwdd3Q8VIL2 267 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 4933407L21RikQ9D476 131 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Igkv4-86A0A0G2JGE7 114 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Kdf1A2A9F4 397 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 AgmatA2AS89 358 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 P01808 119 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 GrprP21729 384 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1283Q7TQY4 305 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Kbtbd11Q8BNW9 633 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm5447Q8BPB2 115 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 SdhbQ9CQA3 282 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gnpnat1Q9JK38 184 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Sectm1bQ9JL59 212 aa13.88□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Trav8n-2A0A075B633 112 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm438B1ASB3 393 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Zfp707F6QUN2 391 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Sult2a4L7N245 285 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 SncaO55042 140 aaKnown RBP13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 MplQ08351 625 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm11541Q8C4D8 108 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr639Q8VGY8 316 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Zmat5Q9CQR5 170 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Cthrc1Q9D1D6 245 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Dtd1Q9DD18 209 aaKnown RBP13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ube2j1Q9JJZ4 318 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 HcstQ9QUJ0 79 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Pappa2E9PZ87 1789 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Nup210lQ9D2F7 1881 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 4930563M21RikA0A1L1SUT5 578 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Fcrl6A1YIY0 268 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Tex45G3XA23 500 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 P01654 111 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 P01656 111 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 P03977 111 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ctxn2Q3URE8 81 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Inca1Q6PKN7 231 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr57Q8VGU7 319 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 B3gat1Q9CW73 334 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 MrnipQ9D1F5 335 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Pcdh15Q99PJ1 1943 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gprin2D3Z1D7 455 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Vmn1r103K7N6X7 305 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Vmn1r151L7N288 305 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Nkx2-1P50220 372 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1290Q7TQX8 312 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1282Q7TQY5 305 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Mitd1Q8VDV8 249 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr497Q8VG08 314 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Nat8Q9JIY7 227 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Timm8a1Q9WVA2 97 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Tmem196V9GX04 182 aa13.87□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Mtnd4lP03903 98 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 AstlQ6HA09 435 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gpr6Q6YNI2 363 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Cd99l2Q8BIF0 237 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1301Q8VGE7 312 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Dmbx1Q91ZK4 381 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Rgs19Q9CX84 216 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gng12Q9DAS9 72 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Scgb1b29D2XZ31 93 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ankrd29D3YVV3 309 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Scgb1b20E9PWZ2 93 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Rabl2E9Q9D5 223 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gabra2P26048 451 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Tpt1P63028 172 aaKnown RBP13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Slc7a10P63115 530 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ear2P97425 156 aa13.86□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Adra2cQ01337 458 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 85.2 ms