RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 NEUROG2Q9H2A3 272 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 ZNF442Q9H7R0 627 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 LRRC40Q9H9A6 602 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 CISHQ9NSE2 258 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 RAB20Q9NX57 234 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 HPCAL4Q9UM19 191 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 HS3ST2Q9Y278 367 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 COQ4Q9Y3A0 265 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 CSDC2Q9Y534 153 aaKnown RBP0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 TENM4Q6N022 2769 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 CENPEQ02224 2701 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 MAST4O15021 2626 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 TLN1Q9Y490 2541 aaKnown RBP0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 SPTAN1Q13813 2472 aaKnown RBP0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 HIVEP3Q5T1R4 2406 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 ZFHX4Q86UP3 3567 aa0.75□□□□□ -2.29
PTP4A2-220ENST00000627328 MED13LQ71F56 2210 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 SNRNP200O75643 2136 aaKnown RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 FLNCQ14315 2725 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 HEATR5BQ9P2D3 2071 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 USP9XQ93008 2570 aaPredicted RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 TNRC6AQ8NDV7 1962 aaKnown RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 NUP210LQ5VU65 1888 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 CELSR2Q9HCU4 2923 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 SYNJ2BP-COX16A0A087WUM0 186 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 GOLGA6L7A0A1B0GV03 622 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 IZUMO1RA6ND01 250 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 OR5K4A6NMS3 321 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 C10orf142B7Z368 130 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 M0QYV0 167 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 M0R1X1 148 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 SIRPB1O00241 398 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 KPNA3O00505 521 aaPredicted RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 SLC31A1O15431 190 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 KDELR3O43731 214 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 KLRC4O43908 158 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 TNFSF15O95150 251 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 TNFP01375 233 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 TPM2P07951 284 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 RHOCP08134 193 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 CCDC172P0C7W6 258 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 LIPCP11150 499 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 CASP1P29466 404 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 OR1E1P30953 314 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 HNRNPH3P31942 346 aaKnown RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 PFN2P35080 140 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 APLNRP35414 380 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 ERFP50548 548 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 NDUFA8P51970 172 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 EIF3EP60228 445 aaKnown RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 RPS24P62847 133 aaKnown RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 CCL7P80098 99 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 CUL2Q13617 745 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 EXOC3L4Q17RC7 722 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 GOLGA7BQ2TAP0 167 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 KRTAP25-1Q3LHN0 102 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 BRMS1LQ5PSV4 323 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 PIP5KL1Q5T9C9 394 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 SYPL2Q5VXT5 272 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 SPOPLQ6IQ16 392 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 PPP1R2P3Q6NXS1 205 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 FAM173BQ6P4H8 233 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 FA2HQ7L5A8 372 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 HORMAD1Q86X24 394 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 SLC25A45Q8N413 288 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 RPRMLQ8N4K4 120 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 RNF10Q8N5U6 811 aaKnown RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 TMEM35BQ8NCS4 154 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 NUBPLQ8TB37 319 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 UBA3Q8TBC4 463 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 LMX1AQ8TE12 382 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 ZNF606Q8WXB4 792 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 NT5C3BQ969T7 300 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 KIAA1143Q96AT1 154 aaPredicted RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 TEAD3Q99594 435 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 CALN1Q9BXU9 219 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 ZYG11BQ9C0D3 744 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 BLZF1Q9H2G9 400 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 ASCL3Q9NQ33 180 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 DDIT4Q9NX09 232 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 SLC2A8Q9NY64 477 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 COX16Q9P0S2 106 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 FADS3Q9Y5Q0 445 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 POLEQ07864 2286 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 PKDREJQ9NTG1 2253 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 UBR5O95071 2799 aaPredicted RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 ITPR2Q14571 2701 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 SMG1Q96Q15 3661 aaKnown RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 HECTD1Q9ULT8 2610 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 USP9YO00507 2555 aaPredicted RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 MPDZO75970 2070 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 LRRK2Q5S007 2527 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 UTP20O75691 2785 aaKnown RBP0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 TEX15Q9BXT5 2789 aa0.74□□□□□ -2.29
PTP4A2-220ENST00000627328 DNAJC13O75165 2243 aa0.73□□□□□ -2.29
PTP4A2-220ENST00000627328 CACNA1CQ13936 2221 aa0.73□□□□□ -2.29
PTP4A2-220ENST00000627328 POLQO75417 2590 aa0.73□□□□□ -2.29
PTP4A2-220ENST00000627328 INTS1Q8N201 2190 aaKnown RBP0.73□□□□□ -2.29
PTP4A2-220ENST00000627328 FREM3P0C091 2139 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms