RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 RAB36O95755 333 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 IFNA5P01569 189 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 TRBV12-3P01733 135 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 OCM2P0CE71 109 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 LIMS3P0CW19 117 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 LIMS4P0CW20 117 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 RAB5AP20339 215 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 PVALBP20472 110 aaPredicted RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 G0S2P27469 103 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 HSD11B1P28845 292 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 GRPRP30550 384 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 FUSP35637 526 aaKnown RBP eCLIP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 TUFMP49411 452 aaKnown RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 ACOT2P49753 483 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 GNG10P50151 68 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 PSMD7P51665 324 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 NKX2-5P52952 324 aaPredicted RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 CEBPGP53567 150 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 MAGOHP61326 146 aaKnown RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 ST3GAL4Q11206 333 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 TRAM1Q15629 374 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 SNCBQ16143 134 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 IMPG1Q17R60 797 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 SLC36A2Q495M3 483 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 PYDC2Q56P42 97 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 NIPAL1Q6NVV3 410 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 DRAM2Q6UX65 266 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 RAB43Q86YS6 212 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 CA13Q8N1Q1 262 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 Q8N402 240 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 CCDC112Q8NEF3 446 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 OR8G5Q8NG78 346 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 DYNC2LI1Q8TCX1 351 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 DOK4Q8TEW6 326 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 RNF133Q8WVZ7 376 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 S100PBPQ96BU1 408 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 RCN3Q96D15 328 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 OTUB2Q96DC9 234 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 YIPF6Q96EC8 236 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 CCDC42Q96M95 316 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 TMEM56Q96MV1 263 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 MBOAT7Q96N66 472 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 TSNAXQ99598 290 aaKnown RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 C20orf144Q9BQM9 153 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 NXF2Q9GZY0 626 aaKnown RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 DUSP21Q9H596 190 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 METTL8Q9H825 291 aaKnown RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 MRPL40Q9NQ50 206 aaKnown RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 PARP11Q9NR21 331 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 MCTS1Q9ULC4 181 aaKnown RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 TFR2Q9UP52 801 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 OR51B2Q9Y5P1 312 aa1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 USP42Q9H9J4 1324 aaKnown RBP1.86□□□□□ -2.11
SCAMP1-205ENST00000614488 CCL15-CCL14A0A0B4J2E2 113 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 FAM240AA0A1B0GVK7 77 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 OR2AT4A6NND4 320 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 FTCDNL1E5RQL4 147 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 F5H768 121 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 M0R1B8 84 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 TGOLN2O43493 480 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 HPGDSO60760 199 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 HLA-DRAP01903 254 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 GFAPP14136 432 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 UGT2B7P16662 529 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 SERPINB9P50453 376 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 AP1S2P56377 157 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 POLR2GP62487 172 aaKnown RBP eCLIP1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 MRPS25P82663 173 aaKnown RBP1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 MLLT11Q13015 90 aaPredicted RBP1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 TRIP13Q15645 432 aaPredicted RBP1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 CCL15Q16663 113 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 C6orf99Q4VX62 202 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 TTMPQ5BVD1 217 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 PDZD11Q5EBL8 140 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 ZNF678Q5SXM1 525 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 HBMQ6B0K9 141 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 OR2T5Q6IEZ7 315 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 MORN3Q6PF18 240 aaPredicted RBP1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 OR4M2Q8NGB6 313 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 OR2T29Q8NH02 315 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 YIPF5Q969M3 257 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 PACRGQ96M98 296 aaPredicted RBP1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 GPR21Q99679 349 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 GPR22Q99680 433 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 SFXN3Q9BWM7 321 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 SLC19A3Q9BZV2 496 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 OR51B6Q9H340 312 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 DSN1Q9H410 356 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 METTL17Q9H7H0 456 aaPredicted RBP1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 HRASLSQ9HDD0 168 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 FGFR1OP2Q9NVK5 253 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 RBFOX1Q9NWB1 397 aaKnown RBP1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 DDIT4Q9NX09 232 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 RAB23Q9ULC3 237 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 ACOT9Q9Y305 439 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 TTC21AQ8NDW8 1320 aa1.85□□□□□ -2.11
SCAMP1-205ENST00000614488 VWA8A3KMH1 1905 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 A0A1W2PQL4 384 aaPredicted RBP1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 SLC5A10A0PJK1 596 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 C9J4A7 227 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms