RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LIFP15018 202 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 ZNF43P17038 809 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 CDAP32320 146 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 APLNRP35414 380 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 FOLR3P41439 243 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 CHRFAM7AQ494W8 412 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 GLIPR1L1Q6UWM5 242 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 KIR2DL5AQ8N109 375 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 SLC35G3Q8N808 338 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 OR2G3Q8NGZ4 309 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 OR4X1Q8NH49 305 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 SYT3Q9BQG1 590 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 ZNF160Q9HCG1 818 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 POLR1DQ9Y2S0 133 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 COL27A1Q8IZC6 1860 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 B4E171 279 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 ST8SIA3O43173 380 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 PITX3O75364 302 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 TSPAN7P41732 249 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 MLF1P58340 268 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 CCL20P78556 96 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 RPS19BP1Q86WX3 136 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 ZNF573Q86YE8 665 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 TGIF2LYQ8IUE0 185 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 OR2AJ1Q8NGZ0 328 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 OR14L1PQ8NHC6 308 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 TMEM18Q96B42 140 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 A0A1B0GV50 99 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 SERPINE3A8MV23 424 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 TRDCB7Z8K6 153 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 ZNF878C9JN71 531 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 GEMIN2O14893 280 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 FUT3P21217 361 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 DUSP1P28562 367 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 CSNK1A1P48729 337 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 DSCR4P56555 118 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 TMEM50BP56557 158 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 EIF3IQ13347 325 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 C4orf17Q53FE4 359 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 C1orf194Q5T5A4 169 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 CLDND2Q8NHS1 167 aa12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 GNPNAT1Q96EK6 184 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 ADAT3Q96EY9 351 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 C1orf147Q96MC9 270 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-220ENST00000560998 FRYLO94915 3013 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 G3V3Y1 287 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 ZIC3O60481 467 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 ACP1P24666 158 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 CEBPGP53567 150 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 PAX5Q02548 391 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 TLE4Q04727 773 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 CLN3Q13286 438 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 RTN4RL2Q86UN3 420 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 FAM89BQ8N5H3 189 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 ARHGAP5-AS1Q96IT6 56 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 CABLES2Q9BTV7 478 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 ST6GALNAC5Q9BVH7 336 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 MOB1AQ9H8S9 216 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 TECTAO75443 2155 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 VPS13AQ96RL7 3174 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 TRAV1-1A0A0B4J248 108 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 LOC102723971A0A1B0GUV8 181 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 ZNF732B4DXR9 585 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 SDCBPO00560 298 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 TLX3O43711 291 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 ZNF20P17024 532 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 ATP6V0CP27449 155 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 CLDN17P56750 224 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 GABREP78334 506 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 EWSR1Q01844 656 aaKnown RBP eCLIP12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 COTL1Q14019 142 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 GNMTQ14749 295 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 LPAL2Q16609 132 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 PYGO2Q9BRQ0 406 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 OR10A2Q9H208 303 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 PNRC2Q9NPJ4 139 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 P4HTMQ9NXG6 502 aa12.09□□□□□ -0.47
RABGGTA-220ENST00000560998 LNP1A1A4G5 178 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 IGHEP01854 428 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 RPL23AP62750 156 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 MRPS11P82912 194 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 ZNF468Q5VIY5 522 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 RAET1LQ5VY80 246 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 FBXW12Q6X9E4 464 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 THNSL2Q86YJ6 484 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 FBXL14Q8N1E6 418 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 OR51E1Q8TCB6 317 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 BOD1Q96IK1 185 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 WNT5BQ9H1J7 359 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 NAA60Q9H7X0 242 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 LRFN1Q9P244 771 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 PADI1Q9ULC6 663 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 ZDBF2Q9HCK1 2354 aa12.08□□□□□ -0.48
RABGGTA-220ENST00000560998 XKRY2A2RUG3 117 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 RER1O15258 196 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 CEACAM1P13688 526 aa12.07□□□□□ -0.48
RABGGTA-220ENST00000560998 ZNF17P17021 662 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms