RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CLHC1Q8NHS4 586 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 UBA3Q8TBC4 463 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 FAM81AQ8TBF8 368 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 NT5CQ8TCD5 201 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 C10orf105Q8TEF2 133 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 KCTD4Q8WVF5 259 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 TSEN15Q8WW01 171 aaKnown RBP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 ING5Q8WYH8 240 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 C22orf15Q8WYQ4 148 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 KIAA1143Q96AT1 154 aaPredicted RBP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 RCN3Q96D15 328 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 MRPL48Q96GC5 212 aaKnown RBP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 REEP6Q96HR9 211 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 C9orf72Q96LT7 481 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 QKIQ96PU8 341 aaKnown RBP eCLIP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 METTL26Q96S19 204 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 UTP23Q9BRU9 249 aaKnown RBP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 TMED9Q9BVK6 235 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 TIMM21Q9BVV7 248 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 BEX2Q9BXY8 128 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 ULBP1Q9BZM6 244 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 ARL6Q9H0F7 186 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 SLC38A1Q9H2H9 487 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 FBXL15Q9H469 300 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 FBXO44Q9H4M3 255 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 METTL17Q9H7H0 456 aaPredicted RBP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 AUNIPQ9H7T9 357 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 PLEKHA1Q9HB21 404 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 RBM22Q9NW64 420 aaKnown RBP eCLIP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 RPUSD1Q9UJJ7 312 aaKnown RBP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 RABL2BQ9UNT1 228 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 SLC7A11Q9UPY5 501 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 RRP15Q9Y3B9 282 aaKnown RBP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 TBL2Q9Y4P3 447 aaKnown RBP0.01□□□□□ -2.41
FOXN3-216ENST00000557496 HEY1Q9Y5J3 304 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 KPTNQ9Y664 436 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 MTCH2Q9Y6C9 303 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 PLEKHG2Q9H7P9 1386 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 NOS1P29475 1434 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 ARAP3Q8WWN8 1544 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 NEURL4Q96JN8 1562 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 LAMB4A4D0S4 1761 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 NAV3Q8IVL0 2385 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 ZDBF2Q9HCK1 2354 aa0.01□□□□□ -2.41
FOXN3-216ENST00000557496 CELSR1Q9NYQ6 3014 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 TRAV8-3A0A0A6YYJ7 113 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 A0A0J9YYE9 177 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 SBNO1A3KN83 1393 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 CTAGE15A4D2H0 777 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 GMNCA6NCL1 334 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 ZNF705FA8MVS1 300 aaPredicted RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 C9JQL5 133 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 RTEL1-TNFRSF6BF6WH68 1400 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 KLRC4-KLRK1H3BQV0 150 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 K7ERS5 55 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 M0QXV9 152 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 ZNF701M0R085 212 aaPredicted RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 SLC17A3O00476 420 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 MPHOSPH10O00566 681 aaKnown RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 POLR3AO14802 1390 aaPredicted RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 POLR3GO15318 223 aaPredicted RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 EEF1E1O43324 174 aaKnown RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 TRAPPC3O43617 180 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 TCF21O43680 179 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 SLC25A20O43772 301 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 MCM3APO60318 1980 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 COX7A2P2O60397 106 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 SHOX2O60902 331 aaPredicted RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 DENND4BO75064 1496 aaPredicted RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 PDCD6O75340 191 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 ALOX12BO75342 701 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 SC5DO75845 299 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 MYO1DO94832 1006 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 PLEKHA8P1O95397 391 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 BRI3O95415 125 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 CA2P00918 260 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 TRBC1P01850 177 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 CRYGDP07320 174 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 CECR9P0C854 216 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 ZNF705DP0CH99 300 aaPredicted RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 ZNF705BP0CI00 300 aaPredicted RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 GFAPP14136 432 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 ZNF3P17036 446 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 SRMP19623 302 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 EIF2S2P20042 333 aaKnown RBP0□□□□□ -2.41
FOXN3-216ENST00000557496 ALOX5APP20292 161 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 GALP22466 123 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 IVDP26440 423 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 HTR2CP28335 458 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 CSKP41240 450 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 MAGEA1P43355 309 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 XKP51811 444 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 DAOAP59103 153 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 RAB11AP62491 216 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 SLC35B1P78383 322 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 BSPH1Q075Z2 132 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 TRDNQ13061 729 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 WDR43Q15061 677 aaKnown RBP eCLIP0□□□□□ -2.41
FOXN3-216ENST00000557496 RCN1Q15293 331 aa0□□□□□ -2.41
FOXN3-216ENST00000557496 GUSBP1Q15486 140 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms