RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 OR5A2Q8NGI9 324 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 OR5L1Q8NGL2 311 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 ABHD3Q8WU67 409 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 PSMF1Q92530 271 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 SS18L1O75177 396 aaPredicted RBP19.99■□□□□ 0.79
FOXA1-202ENST00000545425 ARF1P84077 181 aaKnown RBP19.99■□□□□ 0.79
FOXA1-202ENST00000545425 MRPL21Q7Z2W9 205 aaKnown RBP19.99■□□□□ 0.79
FOXA1-202ENST00000545425 ZNF565Q8N9K5 539 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 CPEB3Q8NE35 698 aaKnown RBP19.99■□□□□ 0.79
FOXA1-202ENST00000545425 OR2M7Q8NG81 312 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 ERGIC1Q969X5 290 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 TMEM231Q9H6L2 316 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 ZNF703Q9H7S9 590 aaPredicted RBP19.99■□□□□ 0.79
FOXA1-202ENST00000545425 TUBA4BQ9H853 241 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 FAM96BQ9Y3D0 163 aa19.99■□□□□ 0.79
FOXA1-202ENST00000545425 CACNA1BQ00975 2339 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 C21orf140B9A014 251 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 UMAD1C9J7I0 102 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 S100GP29377 79 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 CD80P33681 288 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 KCNJ3P48549 501 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 LHX2P50458 406 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 PRDX4Q13162 271 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 TMEM88Q6PEY1 159 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 CALHM1Q8IU99 346 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 DMBX1Q8NFW5 382 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 PAPOLGQ9BWT3 736 aaKnown RBP19.98■□□□□ 0.79
FOXA1-202ENST00000545425 SPRY4Q9C004 299 aa19.98■□□□□ 0.79
FOXA1-202ENST00000545425 WNT2P09544 360 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 RAB13P51153 203 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 ABHD17BQ5VST6 288 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 CBLN2Q8IUK8 224 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 LINC00518Q8N0U6 118 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 OR56B2PQ8NGI1 322 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 HIST1H2AAQ96QV6 131 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 CACFD1Q9UGQ2 172 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 COL27A1Q8IZC6 1860 aaPredicted RBP19.97■□□□□ 0.79
FOXA1-202ENST00000545425 KMT2BQ9UMN6 2715 aaPredicted RBP19.97■□□□□ 0.79
FOXA1-202ENST00000545425 LRP5LA4QPB2 252 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 BTBD17A6NE02 478 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 TUSC2O75896 110 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 CAMLGP49069 296 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 RPS18P62269 152 aaKnown RBP19.97■□□□□ 0.79
FOXA1-202ENST00000545425 RNPS1Q15287 305 aaKnown RBP19.97■□□□□ 0.79
FOXA1-202ENST00000545425 ZNF845Q96IR2 970 aaPredicted RBP19.97■□□□□ 0.79
FOXA1-202ENST00000545425 C11orf1Q9H5F2 150 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 SLC7A10Q9NS82 523 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 PLA2G2EQ9NZK7 142 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 RCL1Q9Y2P8 373 aaKnown RBP19.97■□□□□ 0.79
FOXA1-202ENST00000545425 MED12Q93074 2177 aa19.97■□□□□ 0.79
FOXA1-202ENST00000545425 TRAPPC2LH3BP13 241 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 PITX3O75364 302 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 LMO1P25800 156 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 BAXQ07812 192 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 ZNF695Q8IW36 515 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 OR2C3Q8N628 320 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 SLC35G3Q8N808 338 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 BOD1Q96IK1 185 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 SMIM3Q9BZL3 60 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 EGLN1Q9GZT9 426 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 PLEKHF2Q9H8W4 249 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 C19orf12Q9NSK7 152 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 ZNF581Q9P0T4 197 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 UBE2J1Q9Y385 318 aaPredicted RBP19.96■□□□□ 0.79
FOXA1-202ENST00000545425 MPC1Q9Y5U8 109 aa19.96■□□□□ 0.79
FOXA1-202ENST00000545425 TNRC6AQ8NDV7 1962 aaKnown RBP19.96■□□□□ 0.79
FOXA1-202ENST00000545425 OR5B21A6NL26 309 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 NKX2-1P43699 371 aaPredicted RBP19.95■□□□□ 0.78
FOXA1-202ENST00000545425 CLDN18P56856 261 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 PLP2Q04941 152 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 RNF212Q495C1 297 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 TIPARPQ7Z3E1 657 aaKnown RBP19.95■□□□□ 0.78
FOXA1-202ENST00000545425 IQCF2Q8IXL9 164 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 DYRK2Q92630 601 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 THOC3Q96J01 351 aaKnown RBP19.95■□□□□ 0.78
FOXA1-202ENST00000545425 IP6K3Q96PC2 410 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 ATP23Q9Y6H3 246 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 PINLYPA6NC86 204 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 HSPA12AO43301 675 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 IFNA4P05014 189 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 OR8U9P0C7N5 309 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 SLC25A6P12236 298 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 UCP1P25874 307 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 GNRHRP30968 328 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 DAZAP2Q15038 168 aaPredicted RBP19.95■□□□□ 0.78
FOXA1-202ENST00000545425 GUK1Q16774 197 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 CMTM1Q8IZ96 169 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 OR52M1Q8NGK5 317 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 OR8U1Q8NH10 309 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 TP53RKQ96S44 253 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 IFT22Q9H7X7 185 aa19.95■□□□□ 0.78
FOXA1-202ENST00000545425 FREM2Q5SZK8 3169 aa19.94■□□□□ 0.78
FOXA1-202ENST00000545425 NCKAP5O14513 1909 aa19.94■□□□□ 0.78
FOXA1-202ENST00000545425 J3QW42 95 aa19.94■□□□□ 0.78
FOXA1-202ENST00000545425 EWSR1Q01844 656 aaKnown RBP eCLIP19.94■□□□□ 0.78
FOXA1-202ENST00000545425 OR8G1Q15617 311 aa19.94■□□□□ 0.78
FOXA1-202ENST00000545425 MIDNQ504T8 468 aa19.94■□□□□ 0.78
FOXA1-202ENST00000545425 HPSE2Q8WWQ2 592 aa19.94■□□□□ 0.78
FOXA1-202ENST00000545425 SLC39A7Q92504 469 aa19.94■□□□□ 0.78
FOXA1-202ENST00000545425 WFDC1Q9HC57 220 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms