RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 M0QYG6 137 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 RP2O75695 350 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 NDUFB6O95139 128 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 KNG1P01042 644 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 TBPP20226 339 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 PRDX2P32119 198 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 MPV17LQ2QL34 196 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 OR51S1Q8NGJ8 323 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 TINAGL1Q9GZM7 467 aaPredicted RBP13.34□□□□□ -0.27
XRCC1-202ENST00000543982 CHST6Q9GZX3 395 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 ING3Q9NXR8 418 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 RASL12Q9NYN1 266 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 DYSFO75923 2080 aa13.34□□□□□ -0.27
XRCC1-202ENST00000543982 IGKV1D-8A0A087WSZ0 117 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 FCN3O75636 299 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 GYPAP02724 150 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 COL10A1Q03692 680 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 MEF2DQ14814 521 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 RBMS2Q15434 407 aaKnown RBP13.33□□□□□ -0.28
XRCC1-202ENST00000543982 RNASE10Q5GAN6 216 aaKnown RBP13.33□□□□□ -0.28
XRCC1-202ENST00000543982 OR52W1Q6IF63 320 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 C20orf204Q6ZNR8 217 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 C17orf107Q6ZR85 190 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 FGFRL1Q8N441 504 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 OR11L1Q8NGX0 322 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 ANGPTL6Q8NI99 470 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 PLPPR1Q8TBJ4 325 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 SNAPC3Q92966 411 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 DPCDQ9BVM2 203 aaPredicted RBP13.33□□□□□ -0.28
XRCC1-202ENST00000543982 IFT22Q9H7X7 185 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 ALG5Q9Y673 324 aa13.33□□□□□ -0.28
XRCC1-202ENST00000543982 SH2D1BO14796 132 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 GOSR1O95249 250 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 SMIM21Q3B7S5 101 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 SPIN3Q5JUX0 258 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 HOGA1Q86XE5 327 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 SHARPINQ9H0F6 387 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 RAB1BQ9H0U4 201 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 PPA2Q9H2U2 334 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 DNAJB11Q9UBS4 358 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 MAB21L2Q9Y586 359 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 NPTNQ9Y639 398 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 PTPN13Q12923 2485 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 CSMD2Q7Z408 3487 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 TRAV39A0A0B4J263 110 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 PEX14O75381 377 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 AMY2AP04746 511 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 HNRNPCP07910 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
XRCC1-202ENST00000543982 ZNF735P0CB33 412 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 LMO1P25800 156 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 HRH1P35367 487 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 ZMYND11Q15326 602 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 TEX36Q5VZQ5 186 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 STUMQ69YW2 141 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 LINC00596Q86U02 117 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 AKAP14Q86UN6 197 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 ZNRF1Q8ND25 227 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 OR4K15Q8NH41 348 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 CCL13Q99616 98 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 ST6GALNAC5Q9BVH7 336 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 SCP2D1Q9UJQ7 156 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 FLVCR2Q9UPI3 526 aa13.32□□□□□ -0.28
XRCC1-202ENST00000543982 C7orf66A4D0T2 115 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 OOEPA6NGQ2 149 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 HMX3A6NHT5 357 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 DISC1C4P0D8 188 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 H3BUI4 141 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 TNFRSF13BO14836 293 aaPredicted RBP13.31□□□□□ -0.28
XRCC1-202ENST00000543982 ZNF737O75373 536 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 TRAPPC2P0DI81 140 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 TRAPPC2BP0DI82 140 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 GABRA2P47869 451 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 LYPD2Q6UXB3 125 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 HPS1Q92902 700 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 SLC2A8Q9NY64 477 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 DSCAMO60469 2012 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 POLQO75417 2590 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 A0A0A6YYJ9 748 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 IRF2P14316 349 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 OR3A1P47881 315 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 MRPS15P82914 257 aaKnown RBP13.31□□□□□ -0.28
XRCC1-202ENST00000543982 ACTBL2Q562R1 376 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 PAN3Q58A45 887 aaKnown RBP13.31□□□□□ -0.28
XRCC1-202ENST00000543982 BEST4Q8NFU0 473 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 SLC6A7Q99884 636 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 CMSS1Q9BQ75 279 aaKnown RBP13.31□□□□□ -0.28
XRCC1-202ENST00000543982 SLC25A21Q9BQT8 299 aaPredicted RBP13.31□□□□□ -0.28
XRCC1-202ENST00000543982 TMEM165Q9HC07 324 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 EDARQ9UNE0 448 aa13.31□□□□□ -0.28
XRCC1-202ENST00000543982 MEX3AA1L020 520 aaKnown RBP13.3□□□□□ -0.28
XRCC1-202ENST00000543982 LGALS8O00214 317 aa13.3□□□□□ -0.28
XRCC1-202ENST00000543982 ARPC1BO15143 372 aaKnown RBP13.3□□□□□ -0.28
XRCC1-202ENST00000543982 DAOP14920 347 aa13.3□□□□□ -0.28
XRCC1-202ENST00000543982 DTYMKP23919 212 aa13.3□□□□□ -0.28
XRCC1-202ENST00000543982 MECP2P51608 486 aaKnown RBP13.3□□□□□ -0.28
XRCC1-202ENST00000543982 CD300CQ08708 224 aa13.3□□□□□ -0.28
XRCC1-202ENST00000543982 ATXN7L3Q14CW9 347 aaPredicted RBP13.3□□□□□ -0.28
XRCC1-202ENST00000543982 MICBQ29980 383 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms