RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ASCL4Q6XD76 172 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 LINC00336Q6ZUF6 198 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 ZNF584Q8IVC4 421 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 BBS7Q8IWZ6 715 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 SYS1Q8N2H4 156 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 RNF175Q8N4F7 328 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 COX18Q8N8Q8 333 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.95□□□□□ -1.94
SNHG1-217ENST00000541578 OR2T29Q8NH02 315 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 OR52N1Q8NH53 320 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 EXOSC8Q96B26 276 aaKnown RBP2.95□□□□□ -1.94
SNHG1-217ENST00000541578 COL21A1Q96P44 957 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 TRNT1Q96Q11 434 aaKnown RBP2.95□□□□□ -1.94
SNHG1-217ENST00000541578 NRTNQ99748 197 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 GABRG3Q99928 467 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 SPNS1Q9H2V7 528 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 CDC42EP4Q9H3Q1 356 aaKnown RBP2.95□□□□□ -1.94
SNHG1-217ENST00000541578 GOLPH3Q9H4A6 298 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 ASB7Q9H672 318 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 XPNPEP1Q9NQW7 623 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 PLSCR3Q9NRY6 295 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 C19orf12Q9NSK7 152 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 IL17CQ9P0M4 197 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 MTFP1Q9UDX5 166 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 OR12D3Q9UGF7 316 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 DNAJC12Q9UKB3 198 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 PPIL1Q9Y3C6 166 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 HYOU1Q9Y4L1 999 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 PRRC2CQ9Y520 2896 aaKnown RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 IGLV11-55A0A075B6I3 123 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 IGHV3-74A0A0B4J1X5 117 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 A0A1B0GW15 77 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 VPS37CA5D8V6 355 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 MGAT4DA6NG13 374 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 OR6C70A6NIJ9 312 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 INS-IGF2F8WCM5 200 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 KRTAP4-16G5E9R7 235 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 PIRO00625 290 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 GPR171O14626 319 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 ENSAO43768 121 aaKnown RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 GMDSO60547 372 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 CDK14O94921 469 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 TACSTD2P09758 323 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 OR4Q2P0C623 313 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 PGA5P0DJD9 388 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 F8A1P23610 371 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 LCN1P31025 176 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 PPICP45877 212 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 CSNK1A1P48729 337 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 DNASE1L1P49184 302 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 SERPINB9P50453 376 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 ATP5J2P56134 94 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 WNT4P56705 351 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 EIF3IQ13347 325 aaKnown RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 IL17AQ16552 155 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 C18orf21Q32NC0 220 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 LIN52Q52LA3 116 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 ORMDL2Q53FV1 153 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 DHRS4L2Q6PKH6 230 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 RTL4Q6ZR62 310 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 TAC4Q86UU9 113 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 RAB43Q86YS6 212 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 C11orf53Q8IXP5 236 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 C11orf42Q8N5U0 333 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 OR5T1Q8NG75 326 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 OR10G4Q8NGN3 311 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 BLOC1S5Q8TDH9 187 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 KCTD4Q8WVF5 259 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 PYDC1Q8WXC3 89 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 CACNG8Q8WXS5 425 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 RGP1Q92546 391 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 TNFRSF14Q92956 283 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 RERGQ96A58 199 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 BMFQ96LC9 184 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 TSNAXQ99598 290 aaKnown RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 AGMATQ9BSE5 352 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 BEX2Q9BXY8 128 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 SLIRPQ9GZT3 109 aaKnown RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 SLC22A4Q9H015 551 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 SYT4Q9H2B2 425 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 ZDHHC4Q9NPG8 344 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 PARVAQ9NVD7 372 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 CMTM6Q9NX76 183 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 VAPAQ9P0L0 249 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 RPL26L1Q9UNX3 145 aaKnown RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 SLC22A14Q9Y267 594 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 MED13LQ71F56 2210 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 USP9YO00507 2555 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-217ENST00000541578 POLQO75417 2590 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 ITPR3Q14573 2671 aa2.94□□□□□ -1.94
SNHG1-217ENST00000541578 FBN2P35556 2912 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 TRAV8-7A0A075B6U6 113 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 IGLV1-36A0A0B4J1U3 117 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 F8W036 122 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 TOR1AO14656 332 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 ACOX3O15254 700 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 AQP9O43315 295 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 ERI3O43414 337 aaKnown RBP2.93□□□□□ -1.94
SNHG1-217ENST00000541578 ALOX12BO75342 701 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms