RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 RNF152Q8N8N0 203 aa15.84■□□□□ 0.13
SQSTM1-215ENST00000514093 ADAT3Q96EY9 351 aaPredicted RBP15.84■□□□□ 0.13
SQSTM1-215ENST00000514093 EAF1Q96JC9 268 aaPredicted RBP15.84■□□□□ 0.13
SQSTM1-215ENST00000514093 GON7Q9BXV9 100 aa15.84■□□□□ 0.13
SQSTM1-215ENST00000514093 CALYQ9NYX4 217 aa15.84■□□□□ 0.13
SQSTM1-215ENST00000514093 SLC33A1O00400 549 aaPredicted RBP15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 HSPB6O14558 160 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 KRT8P05787 483 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 CSN2P05814 226 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 FAM53AQ6NSI3 398 aaPredicted RBP15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 TGIF2LXQ8IUE1 241 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 Q8N9W7 124 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 DNAAF1Q8NEP3 725 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 OR5D18Q8NGL1 313 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 OR13A1Q8NGR1 328 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 RFESDQ8TAC1 157 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 RBMXL1Q96E39 390 aaKnown RBP15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 COMMD4Q9H0A8 199 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 CLN6Q9NWW5 311 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 NDE1Q9NXR1 346 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 IDI2-AS1Q9NZ38 188 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 OR6C3Q9NZP0 311 aa15.83■□□□□ 0.12
SQSTM1-215ENST00000514093 SPNP16150 400 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 INSL3P51460 131 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 CFHR3Q02985 330 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 TRIM25Q14258 630 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 ASPHD1Q5U4P2 390 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 PRSS35Q8N3Z0 413 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 OR1N2Q8NGR9 330 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 HAVCR2Q8TDQ0 301 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 SPACA5Q96QH8 159 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 OR5B12Q96R08 314 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 MNTQ99583 582 aa15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 LIN7CQ9NUP9 197 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-215ENST00000514093 LOC107986453A0A1B0GWG9 222 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 TRIM64CA6NLI5 447 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 DEGS1O15121 323 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 ATF1P18846 271 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 CRISP1P54107 249 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 EBI3Q14213 229 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 Q8N6K4 173 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 OR10X1Q8NGY0 326 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 PP6455Q8WZ26 134 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 HSPB9Q9BQS6 159 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 OSBPL10Q9BXB5 764 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 GNB4Q9HAV0 340 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 EDA2RQ9HAV5 297 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 ISYNA1Q9NPH2 558 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 H2AFY2Q9P0M6 372 aaPredicted RBP15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 KIF25Q9UIL4 384 aa15.81■□□□□ 0.12
SQSTM1-215ENST00000514093 MEIKINA0A087WXM9 373 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 IGHV1-3A0A0C4DH29 117 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 HSD17B6O14756 317 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 SNX3O60493 162 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 KDM4BO94953 1096 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 IGHG4P01861 327 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 ANXA8P13928 327 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 PRKACBP22694 351 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 LHFPL2Q6ZUX7 228 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 ZNF429Q86V71 674 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 ZNF565Q8N9K5 539 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 DCUN1D4Q92564 292 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 FGGYQ96C11 551 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 ISOC1Q96CN7 298 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 PLSCR3Q9NRY6 295 aa15.8■□□□□ 0.12
SQSTM1-215ENST00000514093 RRP9O43818 475 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 MPZL2O60487 215 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 SAP30O75446 220 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 OR8U8P0C7N1 319 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 GP9P14770 177 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 VDAC1P21796 283 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 PSMB8P28062 276 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 CDK5R1Q15078 307 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 PTGES3Q15185 160 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 AADACL4Q5VUY2 407 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 ADGRG5Q8IZF4 528 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 TCEANCQ8N8B7 351 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 CHST4Q8NCG5 386 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 CCDC54Q8NEL0 328 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 OR2T10Q8NGZ9 312 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 MRGPRDQ8TDS7 321 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 C10orf35Q96D05 121 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 KCTD7Q96MP8 289 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 OPALINQ96PE5 141 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 RASL11BQ9BPW5 248 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 KLK15Q9H2R5 256 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 NEK6Q9HC98 313 aa15.79■□□□□ 0.12
SQSTM1-215ENST00000514093 TRAV39A0A0B4J263 110 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 A0A1W2PQL4 384 aaPredicted RBP15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 METTL15A6NJ78 407 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 APOL3O95236 402 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 IL1AP01583 271 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 C21orf33P30042 268 aaPredicted RBP15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 HTR1FP30939 366 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 KIR3DL2P43630 455 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 GNB1P62873 340 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 ZNF816Q0VGE8 651 aaPredicted RBP15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 SRSF7Q16629 238 aaKnown RBP eCLIP15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 OR51T1Q8NGJ9 327 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 LRGUKQ96M69 825 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms