RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 RAB3AP20336 220 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 PFN2P35080 140 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 KLF17Q5JT82 389 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-204ENST00000504430 TMEM236Q5W0B7 351 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 DNM1P46Q6ZS02 220 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 CHMP1BQ7LBR1 199 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 FAM24BQ8N5W8 94 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 ZNF439Q8NDP4 499 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 OR9G1Q8NH87 305 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 DCPSQ96C86 337 aaKnown RBP4.09□□□□□ -1.75
NIPBL-204ENST00000504430 WBP1Q96G27 269 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 SLC17A9Q9BYT1 436 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 ZNF226Q9NYT6 803 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 ZNF230Q9UIE0 474 aaPredicted RBP4.09□□□□□ -1.75
NIPBL-204ENST00000504430 TRAPPC2LQ9UL33 140 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 MIA2Q96PC5 1412 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 ERCC6Q03468 1493 aa4.09□□□□□ -1.75
NIPBL-204ENST00000504430 TRGV8A0A0C4DH27 118 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 K7ENP7 123 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 K7N7A8 449 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 SLC17A3O00476 420 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 CDX4O14627 284 aaPredicted RBP4.09□□□□□ -1.76
NIPBL-204ENST00000504430 INAFM2P0DMQ5 153 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 KDELR1P24390 212 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 AQP1P29972 269 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 LHX2P50458 406 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 ERVFC1-1P60608 527 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 HIST1H1AQ02539 215 aaPredicted RBP4.09□□□□□ -1.76
NIPBL-204ENST00000504430 RBMY1FQ15415 496 aaKnown RBP4.09□□□□□ -1.76
NIPBL-204ENST00000504430 LTC4SQ16873 150 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 TTC32Q5I0X7 151 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 STEAP4Q687X5 459 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 ATP5L2Q7Z4Y8 100 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 TMEM159Q96B96 161 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 CAPZA3Q96KX2 299 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 PITPNM3Q9BZ71 974 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 SMIM3Q9BZL3 60 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 WDR13Q9H1Z4 485 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 ARMCX1Q9P291 453 aa4.09□□□□□ -1.76
NIPBL-204ENST00000504430 YTHDF2Q9Y5A9 579 aaKnown RBP4.09□□□□□ -1.76
NIPBL-204ENST00000504430 FFAR1O14842 300 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 DUS4LO95620 317 aaKnown RBP4.08□□□□□ -1.76
NIPBL-204ENST00000504430 CCL1P22362 96 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 RPS23P62266 143 aaKnown RBP4.08□□□□□ -1.76
NIPBL-204ENST00000504430 DNLZQ5SXM8 178 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 PLET1Q6UQ28 207 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 HRCT1Q6UXD1 115 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 GRIN2BQ13224 1484 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 PTPRJQ12913 1337 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 IGHV4OR15-8A0A075B7B6 117 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 A0A1B0GW64 132 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 SNAP91O60641 907 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 SLC35G6P0C7Q6 338 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 KLK2P20151 261 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 RPS3P23396 243 aaKnown RBP eCLIP4.08□□□□□ -1.76
NIPBL-204ENST00000504430 EMP1P54849 157 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 TAS2R46P59540 309 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 PAX8Q06710 450 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 ZNF763Q0D2J5 394 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 CCL14Q16627 93 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 FBXL22Q6P050 247 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 TBPL2Q6SJ96 375 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 RDH12Q96NR8 316 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 PLEKHF1Q96S99 279 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 NAA38Q9BRA0 125 aaKnown RBP4.08□□□□□ -1.76
NIPBL-204ENST00000504430 CLEC7AQ9BXN2 247 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 SRXN1Q9BYN0 137 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 KRTAP3-1Q9BYR8 98 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 C20orf85Q9H1P6 137 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 CDC42EP4Q9H3Q1 356 aaKnown RBP4.08□□□□□ -1.76
NIPBL-204ENST00000504430 DNAJC27Q9NZQ0 273 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 PLCH2O75038 1416 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 TRAV8-6A0A0B4J262 113 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 IGKV1-8A0A0C4DH67 115 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 LOC102725191A0A1B0GVB3 256 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 hADV38S2A0JD32 116 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 PRAC2D3DTV9 90 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 PRSS2P07478 247 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 MTPNP58546 118 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 HSPE1P61604 102 aaKnown RBP4.08□□□□□ -1.76
NIPBL-204ENST00000504430 RPS21P63220 83 aaKnown RBP4.08□□□□□ -1.76
NIPBL-204ENST00000504430 PLCXD2Q0VAA5 305 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 RAB42Q8N4Z0 105 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 AQP11Q8NBQ7 271 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 CHST4Q8NCG5 386 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 OR10G8Q8NGN5 311 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 CCL17Q92583 94 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 NEUROG1Q92886 237 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 SLC25A31Q9H0C2 315 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 OR52D1Q9H346 318 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 HMG20AQ9NP66 347 aa4.08□□□□□ -1.76
NIPBL-204ENST00000504430 ZNF71Q9NQZ8 489 aaPredicted RBP4.08□□□□□ -1.76
NIPBL-204ENST00000504430 IGHV3-38A0A0C4DH36 116 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 K7EQG2 157 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 NTN1O95631 604 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 OR4A8P0C604 315 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 PRKACGP22612 351 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 NCBP2P52298 156 aaKnown RBP eCLIP4.07□□□□□ -1.76
NIPBL-204ENST00000504430 NCALDP61601 193 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 PMVKQ15126 192 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms