RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SHEQ5VZ18 495 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 SLC35E4Q6ICL7 350 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 ZNF880Q6PDB4 577 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 PRSS57Q6UWY2 283 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 FAM131AQ6UXB0 335 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 DCDC5Q6ZRR9 648 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 FGFRL1Q8N441 504 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 ZNF561Q8N587 486 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 GDPD1Q8N9F7 314 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 OR5D13Q8NGL4 314 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 OR52I2Q8NH67 350 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 PLPPR1Q8TBJ4 325 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 S100ZQ8WXG8 99 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 CORO2AQ92828 525 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 COQ2Q96H96 371 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 LURAP1Q96LR2 239 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 THAP7Q9BT49 309 aaPredicted RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 DPCDQ9BVM2 203 aaPredicted RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 SRRQ9GZT4 340 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 NCOR1P1Q9H4R4 102 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 ZNF665Q9H7R5 613 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 PATZ1Q9HBE1 687 aaKnown RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 BARX1Q9HBU1 254 aaPredicted RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 MYOZ1Q9NP98 299 aaPredicted RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 RABL2AQ9UBK7 228 aaPredicted RBP4.94□□□□□ -1.62
USP39-213ENST00000467885 CTSZQ9UBR2 303 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 DNAJB11Q9UBS4 358 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 KLK11Q9UBX7 282 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 MTFP1Q9UDX5 166 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 OR14J1Q9UGF5 321 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 GLS2Q9UI32 602 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 AK3Q9UIJ7 227 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 ADAM30Q9UKF2 790 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 EDARQ9UNE0 448 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 RABL2BQ9UNT1 228 aa4.94□□□□□ -1.62
USP39-213ENST00000467885 IGHV4-30-2A0A087WSY4 118 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 IGKV1D-8A0A087WSZ0 117 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 TRBV6-6A0A0A6YYG2 114 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 TMEM235A6NFC5 223 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 CEACAM18A8MTB9 384 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 ADARB2-AS1A8MUL3 147 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 SERPINE3A8MV23 424 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 GABARAPH6UMI1 98 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 NDUFS8O00217 210 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 SULT1C2O00338 296 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 DVL1O14640 695 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 MGST3O14880 152 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 TMPRSS2O15393 492 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 PLA2G10O15496 165 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 ADAM20O43506 726 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 RBBP9O75884 186 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 CSN2P05814 226 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 SELLP14151 372 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 ZNF44P15621 663 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 RCC1P18754 421 aaPredicted RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 GZMHP20718 246 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 DNASE1P24855 282 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 CD40LGP29965 261 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 TALDO1P37837 337 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 MDH2P40926 338 aaKnown RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 GPR6P46095 362 aaPredicted RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 PDLIM4P50479 330 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 DSCR9P59020 149 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 DGCR2P98153 550 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 PAX2Q02962 417 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 IL18Q14116 193 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 RBM39Q14498 530 aaKnown RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 ZNF846Q147U1 533 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 ARL6IP1Q15041 203 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 SRSF7Q16629 238 aaKnown RBP eCLIP4.93□□□□□ -1.62
USP39-213ENST00000467885 PYDC2Q56P42 97 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 SPANXN2Q5MJ10 180 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 TMEM69Q5SWH9 247 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 RSBN1Q5VWQ0 802 aaPredicted RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 TMEM200BQ69YZ2 307 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 ZNF497Q6ZNH5 498 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 PEG10Q86TG7 708 aaKnown RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 SNX29P2Q8IUI4 249 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 C11orf42Q8N5U0 333 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 GVQW1Q8N7I0 195 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 FAM216BQ8N7L0 139 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 C15orf40Q8WUR7 153 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 FCAMRQ8WWV6 532 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 GCDHQ92947 438 aaPredicted RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 NINJ1Q92982 152 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 PHF21AQ96BD5 680 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 PERPQ96FX8 193 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 TSC22D3Q99576 134 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 HDHD3Q9BSH5 251 aaPredicted RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 DCTN5Q9BTE1 182 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 ST6GALNAC5Q9BVH7 336 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 CHST6Q9GZX3 395 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 FAM234AQ9H0X4 552 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 SPACA1Q9HBV2 294 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 Q9N2K0 584 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 MIOXQ9UGB7 285 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 ZNF230Q9UIE0 474 aaPredicted RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 ANAPC10Q9UM13 185 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 RBMX2Q9Y388 322 aaKnown RBP4.93□□□□□ -1.62
USP39-213ENST00000467885 USF3Q68DE3 2245 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms