RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 TENM2Q9NT68 2774 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 CCL24O00175 119 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 MITFO75030 526 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-209ENST00000463631 ZNF20P17024 532 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 NFYBP25208 207 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 LUMP51884 338 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-209ENST00000463631 PAX5Q02548 391 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 TMED1Q13445 227 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 HES1Q14469 280 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 KLHL22Q53GT1 634 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 TEX38Q6PEX7 206 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 OR2G2Q8NGZ5 317 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 OR8U1Q8NH10 309 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 HAVCR2Q8TDQ0 301 aa13.6□□□□□ -0.23
HMGN1-209ENST00000463631 DNAH7Q8WXX0 4024 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 AP4M1O00189 453 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 APOL3O95236 402 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 IL1AP01583 271 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 GYS2P54840 703 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 EBI3Q14213 229 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 CDK5R1Q15078 307 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 KDM4DQ6B0I6 523 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 FDX2Q6P4F2 183 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 ZNF565Q8N9K5 539 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 OR5M8Q8NGP6 311 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 RFT1Q96AA3 541 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 FGGYQ96C11 551 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 HRASLS5Q96KN8 279 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 CALYQ9NYX4 217 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 LINC00527Q9UJ94 153 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 GNG8Q9UK08 70 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 PSG11Q9UQ72 335 aa13.59□□□□□ -0.23
HMGN1-209ENST00000463631 NPIPB11E5RHQ5 1161 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 IGKV1D-33P01593 117 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 IGKV1-33P01594 117 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 GLP1RP43220 463 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 CDX1P47902 265 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-209ENST00000463631 ZNF85Q03923 595 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 SCN1BQ07699 218 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 TP53I3Q53FA7 332 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 SLC16A12Q6ZSM3 486 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 OR5D18Q8NGL1 313 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 OR13A1Q8NGR1 328 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 DUX3Q96PT4 197 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 PRR25Q96S07 402 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 GON7Q9BXV9 100 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 GABARAPL1Q9H0R8 117 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 DCLRE1BQ9H816 532 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 IDI2-AS1Q9NZ38 188 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 FRRS1LQ9P0K9 344 aa13.58□□□□□ -0.24
HMGN1-209ENST00000463631 DEGS1O15121 323 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 OCM2P0CE71 109 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 OCMP0CE72 109 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-209ENST00000463631 ATP6V1E1P36543 226 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 GPR12P47775 334 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 CCR9P51686 369 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 RAB25P57735 213 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 BNIP1Q12981 228 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 FOXE3Q13461 319 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 DIAPH2-AS1Q14236 149 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 KIR2DS1Q14954 304 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 TGIF2LXQ8IUE1 241 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 IZUMO1Q8IYV9 350 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 OR10A7Q8NGE5 316 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 OR8J1Q8NGP2 316 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 OR13C9Q8NGT0 318 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 RFKQ969G6 155 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 SPACA5Q96QH8 159 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 NEK6Q9HC98 313 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 LIN7CQ9NUP9 197 aaKnown RBP13.57□□□□□ -0.24
HMGN1-209ENST00000463631 ING3Q9NXR8 418 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 KIF25Q9UIL4 384 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 POMPQ9Y244 141 aa13.57□□□□□ -0.24
HMGN1-209ENST00000463631 MEIKINA0A087WXM9 373 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 G3V2T6 193 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 HSD17B6O14756 317 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 RPLP1P05386 114 aaKnown RBP13.56□□□□□ -0.24
HMGN1-209ENST00000463631 DBTP11182 482 aaKnown RBP13.56□□□□□ -0.24
HMGN1-209ENST00000463631 CHATP28329 748 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 C21orf33P30042 268 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-209ENST00000463631 MTNR1BP49286 362 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 NANOS3P60323 173 aaKnown RBP13.56□□□□□ -0.24
HMGN1-209ENST00000463631 ZP1P60852 638 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 ZNF816Q0VGE8 651 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-209ENST00000463631 FHL3Q13643 280 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 HNF4GQ14541 408 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 ATP6AP1Q15904 470 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 PNLIPRP3Q17RR3 467 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 DEFB136Q30KP8 78 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 DNAL1Q4LDG9 190 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 CXorf66Q5JRM2 361 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-209ENST00000463631 ELP2Q6IA86 826 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 KCTD20Q7Z5Y7 419 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 Q8N6K4 173 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 CCDC197Q8NCU1 140 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 LEAP2Q969E1 77 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 ABCG5Q9H222 651 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms