RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SDF2L1Q9HCN8 221 aa14.59□□□□□ -0.07
PMS1-213ENST00000441310 DNAJC4Q9NNZ3 241 aa14.59□□□□□ -0.07
PMS1-213ENST00000441310 TMEM242Q9NWH2 141 aa14.59□□□□□ -0.07
PMS1-213ENST00000441310 TMEM225BP0DP42 221 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 GZMHP20718 246 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 BRS3P32247 399 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 TLE1Q04724 770 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 PNRC1Q12796 327 aaPredicted RBP14.58□□□□□ -0.07
PMS1-213ENST00000441310 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.58□□□□□ -0.07
PMS1-213ENST00000441310 COA6Q5JTJ3 125 aaKnown RBP14.58□□□□□ -0.07
PMS1-213ENST00000441310 SAPCD1Q5SSQ6 148 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 GUSBP11Q6P575 273 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 ABHD12BQ7Z5M8 362 aaPredicted RBP14.58□□□□□ -0.07
PMS1-213ENST00000441310 LGI3Q8N145 548 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 RBMXL1Q96E39 390 aaKnown RBP14.58□□□□□ -0.07
PMS1-213ENST00000441310 SLC46A1Q96NT5 459 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 LIME1Q9H400 295 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 NAGKQ9UJ70 344 aa14.58□□□□□ -0.07
PMS1-213ENST00000441310 URB1O60287 2271 aaKnown RBP14.58□□□□□ -0.08
PMS1-213ENST00000441310 TIAF1O95411 115 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 CD33P20138 364 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 TNFSF10P50591 281 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 C16orf82Q7Z2V1 217 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 C1QL2Q7Z5L3 287 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 RNASE8Q8TDE3 154 aaKnown RBP14.58□□□□□ -0.08
PMS1-213ENST00000441310 SDSLQ96GA7 329 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 TBX15Q96SF7 602 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 PCGF1Q9BSM1 259 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 PECRQ9BY49 303 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 ZNF665Q9H7R5 613 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 NAA60Q9H7X0 242 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 IGKV1D-43A0A0B4J1Z2 117 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 A0A1W2PPQ1 181 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 GDF9O60383 454 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 IL33O95760 270 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 IGKV3-11P04433 115 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 CEACAM1P13688 526 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 CD82P27701 267 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 TLE4Q04727 773 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 C6orf201Q7Z4U5 140 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 D2HGDHQ8N465 521 aa14.58□□□□□ -0.08
PMS1-213ENST00000441310 CCNL2Q96S94 520 aaPredicted RBP14.58□□□□□ -0.08
PMS1-213ENST00000441310 MCTS1Q9ULC4 181 aaKnown RBP14.58□□□□□ -0.08
PMS1-213ENST00000441310 NXPH3O95157 252 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 PLCXD2Q0VAA5 305 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 SSPNQ14714 243 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 SHBQ15464 509 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 ZNF248Q8NDW4 579 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 ADIPOR1Q96A54 375 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 P4HTMQ9NXG6 502 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 KNTC1P50748 2209 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 IGKV3D-11A0A0A0MRZ8 115 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 LCATP04180 440 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 FGF8P55075 233 aaPredicted RBP14.57□□□□□ -0.08
PMS1-213ENST00000441310 LCN15Q6UWW0 184 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 TIPARPQ7Z3E1 657 aaKnown RBP14.57□□□□□ -0.08
PMS1-213ENST00000441310 C11orf42Q8N5U0 333 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 SLAMF6Q96DU3 332 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 TBL1XR1Q9BZK7 514 aa14.57□□□□□ -0.08
PMS1-213ENST00000441310 TRAV36DV7A0A075B6V5 113 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 BLACEA4D250 179 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 SSSCA1O60232 199 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 IFI6P09912 130 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 ZNF728P0DKX0 622 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 CCKARP32238 428 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 DYNLT3P51808 116 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 IL22RA1Q8N6P7 574 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 OR11L1Q8NGX0 322 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 ZNF501Q96CX3 271 aaPredicted RBP14.56□□□□□ -0.08
PMS1-213ENST00000441310 A0A1B0GUS0 222 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 A0A1B0GX78 115 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 ZNF850A8MQ14 1090 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 HBE1P02100 147 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 OPRM1P35372 400 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 RRADP55042 308 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 SGCBQ16585 318 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 ZNF100Q8IYN0 542 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 ACY3Q96HD9 319 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 COPS7AQ9UBW8 275 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 AHCTF1Q8WYP5 2266 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 B4E171 279 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 PHF1O43189 567 aaPredicted RBP14.56□□□□□ -0.08
PMS1-213ENST00000441310 LIAT1Q6ZQX7 453 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 CPEB3Q8NE35 698 aaKnown RBP14.56□□□□□ -0.08
PMS1-213ENST00000441310 OR6C1Q96RD1 312 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 GLRX2Q9NS18 164 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 MYO7BQ6PIF6 2116 aa14.56□□□□□ -0.08
PMS1-213ENST00000441310 ETV2O00321 342 aaPredicted RBP14.55□□□□□ -0.08
PMS1-213ENST00000441310 PFN1P07737 140 aaKnown RBP14.55□□□□□ -0.08
PMS1-213ENST00000441310 TDRG1Q3Y452 100 aa14.55□□□□□ -0.08
PMS1-213ENST00000441310 FNDC7Q5VTL7 733 aa14.55□□□□□ -0.08
PMS1-213ENST00000441310 OR2J1Q9GZK6 312 aa14.55□□□□□ -0.08
PMS1-213ENST00000441310 PARD6AQ9NPB6 346 aa14.55□□□□□ -0.08
PMS1-213ENST00000441310 PHF3Q92576 2039 aaKnown RBP14.55□□□□□ -0.08
PMS1-213ENST00000441310 PITX3O75364 302 aa14.55□□□□□ -0.08
PMS1-213ENST00000441310 ANOS1P23352 680 aa14.55□□□□□ -0.08
PMS1-213ENST00000441310 CST9LP1Q5W188 147 aa14.55□□□□□ -0.08
PMS1-213ENST00000441310 WWTR1Q9GZV5 400 aa14.55□□□□□ -0.08
PMS1-213ENST00000441310 PCED1AQ9H1Q7 454 aa14.55□□□□□ -0.08
PMS1-213ENST00000441310 KIAA2026Q5HYC2 2103 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms