RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 WNT9BO14905 357 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 ZNF44P15621 663 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 PPP3CBP16298 524 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 AKR1C4P17516 323 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 SLC25A42Q86VD7 318 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 LRRC20Q8TCA0 184 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 ASB13Q8WXK3 278 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 RDH8Q9NYR8 311 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 RFPL4AA6NLU0 287 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 PRSS44E7EML9 344 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 RFPL4AL1F8VTS6 287 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 CCL21O00585 134 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 RP2O75695 350 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 SCO1O75880 301 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 IGHV3-13P01766 116 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 HLA-AP01891 365 aaKnown RBP17.87■□□□□ 0.45
PTPRF-207ENST00000436724 KLF3P57682 345 aaPredicted RBP17.87■□□□□ 0.45
PTPRF-207ENST00000436724 PPP1R1AQ13522 171 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 ALKAL2Q6UX46 152 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 TMEM108Q6UXF1 575 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 TMEM17Q86X19 198 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 C5orf66Q9H5L9 145 aa17.87■□□□□ 0.45
PTPRF-207ENST00000436724 DPRXA6NFQ7 191 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 OR5H8P0DN80 308 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 PMELP40967 661 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 IL13RA2Q14627 380 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 Q6P435 159 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 RBPMSQ93062 196 aaKnown RBP17.86■□□□□ 0.45
PTPRF-207ENST00000436724 WFIKKN1Q96NZ8 548 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 DHRS9Q9BPW9 319 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 ZNF2Q9BSG1 426 aaPredicted RBP17.86■□□□□ 0.45
PTPRF-207ENST00000436724 MRPL37Q9BZE1 423 aaKnown RBP17.86■□□□□ 0.45
PTPRF-207ENST00000436724 GPR132Q9UNW8 380 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 A0A1B0GWJ7 208 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 ABCD4O14678 606 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 DEGS1O15121 323 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 NMBP08949 121 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 CEBPDP49716 269 aaPredicted RBP17.86■□□□□ 0.45
PTPRF-207ENST00000436724 SPRNQ5BIV9 151 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 WDR82Q6UXN9 313 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 GSG1LQ6UXU4 331 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 LINC00596Q86U02 117 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 Q8IYB0 196 aa17.86■□□□□ 0.45
PTPRF-207ENST00000436724 hCG_1807616A0A1W2PRN6 198 aa17.85■□□□□ 0.45
PTPRF-207ENST00000436724 SIRPB1O00241 398 aa17.85■□□□□ 0.45
PTPRF-207ENST00000436724 NAPSAO96009 420 aa17.85■□□□□ 0.45
PTPRF-207ENST00000436724 M6PRP20645 277 aa17.85■□□□□ 0.45
PTPRF-207ENST00000436724 BSPH1Q075Z2 132 aa17.85■□□□□ 0.45
PTPRF-207ENST00000436724 ZNF660Q6AZW8 331 aaPredicted RBP17.85■□□□□ 0.45
PTPRF-207ENST00000436724 C20orf204Q6ZNR8 217 aa17.85■□□□□ 0.45
PTPRF-207ENST00000436724 SCARB1Q8WTV0 552 aa17.85■□□□□ 0.45
PTPRF-207ENST00000436724 MFFQ9GZY8 342 aa17.85■□□□□ 0.45
PTPRF-207ENST00000436724 ZNF286AQ9HBT8 521 aa17.85■□□□□ 0.45
PTPRF-207ENST00000436724 CEACAM18A8MTB9 384 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 OR2H2O95918 312 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 RPA2P15927 270 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 SRSF4Q08170 494 aaKnown RBP17.84■□□□□ 0.45
PTPRF-207ENST00000436724 PCSK4Q6UW60 755 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 POC1AQ8NBT0 407 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 COQ8AQ8NI60 647 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 CXorf58Q96LI9 332 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 USB1Q9BQ65 265 aaKnown RBP17.84■□□□□ 0.45
PTPRF-207ENST00000436724 TLNRD1Q9H1K6 362 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 RHOFQ9HBH0 211 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 SPACA1Q9HBV2 294 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 NECAP2Q9NVZ3 263 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 OR14J1Q9UGF5 321 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 IGLV3-9A0A075B6K5 115 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 VAMP1P23763 118 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 ZBTB25P24278 435 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 IGSF11Q5DX21 431 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 TMEM65Q6PI78 240 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 SPERTQ8NA61 448 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 FAM122AQ96E09 287 aa17.84■□□□□ 0.45
PTPRF-207ENST00000436724 RTBDNQ9BSG5 229 aaPredicted RBP17.84■□□□□ 0.45
PTPRF-207ENST00000436724 DIDO1Q9BTC0 2240 aaKnown RBP17.84■□□□□ 0.45
PTPRF-207ENST00000436724 MFSD2BA6NFX1 497 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 FAM90A27PA6NNH2 459 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 CD8AP01732 235 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 TFF1P04155 84 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 GLRA1P23415 457 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 FPR2P25090 351 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 PTAFRP25105 342 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 LIN54Q6MZP7 749 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 PEG10Q86TG7 708 aaKnown RBP17.83■□□□□ 0.45
PTPRF-207ENST00000436724 OR5M8Q8NGP6 311 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 TMEM230Q96A57 120 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 HES4Q9HCC6 221 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 MED9Q9NWA0 146 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 TAAR3PQ9P1P4 343 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 NUP50Q9UKX7 468 aa17.83■□□□□ 0.45
PTPRF-207ENST00000436724 C9orf170A2RU37 121 aa17.83■□□□□ 0.44
PTPRF-207ENST00000436724 TPD52L2O43399 206 aaKnown RBP17.83■□□□□ 0.44
PTPRF-207ENST00000436724 SPRY3O43610 288 aa17.83■□□□□ 0.44
PTPRF-207ENST00000436724 CD34P28906 385 aa17.83■□□□□ 0.44
PTPRF-207ENST00000436724 IL13RA1P78552 427 aa17.83■□□□□ 0.44
PTPRF-207ENST00000436724 ZNF146Q15072 292 aa17.83■□□□□ 0.44
PTPRF-207ENST00000436724 LYG2Q86SG7 212 aa17.83■□□□□ 0.44
PTPRF-207ENST00000436724 KDF1Q8NAX2 398 aaPredicted RBP17.83■□□□□ 0.44
PTPRF-207ENST00000436724 CASTOR1Q8WTX7 329 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms