RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611		H0YJX3	145 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	HSPB6	O14558	160 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	SNRNP70	P08621	437 aa	Known RBP	12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	FAM90A15P	P0C7V4	464 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	FAM90A13P	P0C7W8	464 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	FAM90A14P	P0C7W9	464 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	FAM90A24P	P0C7X0	464 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	CGB3	P0DN86	165 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	CGB7	P0DN87	165 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	HOXD3	P31249	432 aa	Predicted RBP	12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	GLP1R	P43220	463 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	MTNR1B	P49286	362 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ZP1	P60852	638 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	SNRPG	P62308	76 aa	Known RBP	12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	KISS1	Q15726	138 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ZNF329	Q86UD4	541 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	SERPINA12	Q8IW75	414 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	OR51D1	Q8NGF3	324 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	OR51T1	Q8NGJ9	327 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	OR5D14	Q8NGL3	314 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	OR56B4	Q8NH76	319 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	DPF1	Q92782	380 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	MRPL48	Q96GC5	212 aa	Known RBP	12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	NR1H4	Q96RI1	486 aa	Predicted RBP	12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ZNF649	Q9BS31	505 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	GPR61	Q9BZJ8	451 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	CALY	Q9NYX4	217 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	KIF25	Q9UIL4	384 aa		12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	EXOG	Q9Y2C4	368 aa	Known RBP	12.01	□□□□□ -0.49
CSNK1E-208	ENST00000431611	SNTN	A6NMZ2	147 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611		J3QR06	171 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	SULT1B1	O43704	296 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	IGHV3-7	P01780	117 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	C21orf33	P30042	268 aa	Predicted RBP	12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	EGFEM1P	Q0D2K5	195 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	HES1	Q14469	280 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	PAN3	Q58A45	887 aa	Known RBP	12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ZNF691	Q5VV52	312 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	C11orf87	Q6NUJ2	197 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	MRPL41	Q8IXM3	137 aa	Known RBP	12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	OR13A1	Q8NGR1	328 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	LEAP2	Q969E1	77 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	MYCBP	Q99417	103 aa	Predicted RBP	12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	BARHL1	Q9BZE3	327 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	NCOR1P1	Q9H4R4	102 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	IDI2-AS1	Q9NZ38	188 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ORC6	Q9Y5N6	252 aa		12	□□□□□ -0.49
CSNK1E-208	ENST00000431611		E9PQ18	207 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ATP5H	O75947	161 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	IL1A	P01583	271 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ALPL	P05186	524 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	RPSA	P08865	295 aa	Known RBP	11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	TMEM11	P17152	192 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	RPL23A	P62750	156 aa	Known RBP	11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	MADCAM1	Q13477	382 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	LTC4S	Q16873	150 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ELP2	Q6IA86	826 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ETV3L	Q6ZN32	361 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	LHFPL3	Q86UP9	236 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	SYS1	Q8N2H4	156 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	PARP16	Q8N5Y8	322 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	DRAM1	Q8N682	238 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	CNIH3	Q8TBE1	160 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	HAVCR2	Q8TDQ0	301 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	CHPT1	Q8WUD6	406 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	LGALS12	Q96DT0	336 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ALG8	Q9BVK2	526 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	DHDH	Q9UQ10	334 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	PSG11	Q9UQ72	335 aa		11.99	□□□□□ -0.49
CSNK1E-208	ENST00000431611	TRAV24	A0A0B4J272	114 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611		A0A1W2PPI3	338 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	SERPINE3	A8MV23	424 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	FGF16	O43320	207 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ZFPL1	O95159	310 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	THBS3	P49746	956 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	RAB7A	P51149	207 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	DIAPH2-AS1	Q14236	149 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	GALE	Q14376	348 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	HNF4G	Q14541	408 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ZSCAN26	Q16670	478 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ZIK1	Q3SY52	487 aa	Predicted RBP	11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	LPCAT4	Q643R3	524 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	OR2W3	Q7Z3T1	314 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	OR8H3	Q8N146	312 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	C5orf56	Q8N8D9	126 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	PXT1	Q8NFP0	134 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	RFESD	Q8TAC1	157 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	TSEN15	Q8WW01	171 aa	Known RBP	11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	CPNE2	Q96FN4	548 aa	Predicted RBP	11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	NOL4L	Q96MY1	436 aa	Predicted RBP	11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	MCRIP2	Q9BUT9	160 aa	Known RBP	11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	LINC00574	Q9H8X3	128 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ISG20L2	Q9H9L3	353 aa	Known RBP	11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	ZFP57	Q9NU63	452 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	AASS	Q9UDR5	926 aa		11.98	□□□□□ -0.49
CSNK1E-208	ENST00000431611	TMEM212	A6NML5	194 aa		11.97	□□□□□ -0.49
CSNK1E-208	ENST00000431611	NUDT19	A8MXV4	375 aa		11.97	□□□□□ -0.49
CSNK1E-208	ENST00000431611	NPIPB11	E5RHQ5	1161 aa		11.97	□□□□□ -0.49
CSNK1E-208	ENST00000431611	EI24	O14681	340 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms