RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ACACAQ13085 2346 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 ANKRD34BA5PLL1 514 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 K7ENP7 123 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 CEACAM8P31997 349 aaPredicted RBP17.57■□□□□ 0.4
USP39-203ENST00000409470 NAAAQ02083 359 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 ZNF345Q14585 488 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 ACOT7LQ6ZUV0 252 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 C1orf174Q8IYL3 243 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 KCNRGQ8N5I3 272 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 PCNPQ8WW12 178 aaKnown RBP17.57■□□□□ 0.4
USP39-203ENST00000409470 CITED4Q96RK1 184 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 M0R1B8 84 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 SIRPB1O00241 398 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 GLI4P10075 376 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 PAN3Q58A45 887 aaKnown RBP17.57■□□□□ 0.4
USP39-203ENST00000409470 CLLU1Q5K131 121 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 SLC51BQ86UW2 128 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 MUCL1Q96DR8 90 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 RSRP1Q9BUV0 290 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 RASL12Q9NYN1 266 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 GSKIPQ9P0R6 139 aa17.57■□□□□ 0.4
USP39-203ENST00000409470 SHANK1Q9Y566 2161 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 KANTRA0A1W2PQU2 76 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 PRRG2O14669 202 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 OR2H2O95918 312 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 CTXN2P0C2S0 81 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 SP6Q3SY56 376 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 BEX5Q5H9J7 111 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 MBNL2Q5VZF2 373 aaKnown RBP17.56■□□□□ 0.4
USP39-203ENST00000409470 C20orf204Q6ZNR8 217 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 CCDC71LQ8N9Z2 235 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 DCUN1D4Q92564 292 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 GSX2Q9BZM3 304 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 MEMO1Q9Y316 297 aa17.56■□□□□ 0.4
USP39-203ENST00000409470 TRBV6-6A0A0A6YYG2 114 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 RNF222A6NCQ9 220 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 IFNA21P01568 189 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 OR5AC1P0C628 307 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 FIP1L1Q6UN15 594 aaKnown RBP17.55■□□□□ 0.4
USP39-203ENST00000409470 OR11L1Q8NGX0 322 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 MSL2Q9HCI7 577 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 MSRB2Q9Y3D2 182 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 DCHS1Q96JQ0 3298 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 RPS10-NUDT3A0A1W2PQS6 291 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 A6NLC8 198 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 SH2D1BO14796 132 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 SPDEFO95238 335 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 BMP5P22003 454 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 TDGF1P3P51864 188 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 HERPUD1Q15011 391 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 RGS7BPQ6MZT1 257 aaPredicted RBP17.55■□□□□ 0.4
USP39-203ENST00000409470 ALKAL2Q6UX46 152 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 Q6ZR03 302 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 Q8NA96 180 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 POC1AQ8NBT0 407 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 GALNT14Q96FL9 552 aa17.55■□□□□ 0.4
USP39-203ENST00000409470 HEATR1Q9H583 2144 aaKnown RBP17.54■□□□□ 0.4
USP39-203ENST00000409470 DSPP15924 2871 aaKnown RBP17.54■□□□□ 0.4
USP39-203ENST00000409470 LINC00862A6NCI5 91 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 SLC33A1O00400 549 aaPredicted RBP17.54■□□□□ 0.4
USP39-203ENST00000409470 B3GALNT1O75752 331 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 MDH2P40926 338 aaKnown RBP17.54■□□□□ 0.4
USP39-203ENST00000409470 TMEM187Q14656 261 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 ZNF146Q15072 292 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 ZNF826PQ6ZT77 177 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 ZNF565Q8N9K5 539 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 SPERTQ8NA61 448 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 SUCNR1Q9BXA5 334 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 RCC1P18754 421 aaPredicted RBP17.54■□□□□ 0.4
USP39-203ENST00000409470 IAH1Q2TAA2 248 aaPredicted RBP17.54■□□□□ 0.4
USP39-203ENST00000409470 SPIN3Q5JUX0 258 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 DOLPP1Q86YN1 238 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 SECTM1Q8WVN6 248 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 SLX1AQ9BQ83 275 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 RNF126Q9BV68 326 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 OR14J1Q9UGF5 321 aa17.54■□□□□ 0.4
USP39-203ENST00000409470 IGKV1-6A0A0C4DH72 117 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 KCNAB3O43448 404 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 BCL2L11O43521 198 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 CRYAAP02489 173 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 ACAA1P09110 424 aaPredicted RBP17.53■□□□□ 0.4
USP39-203ENST00000409470 HLA-DRB3P79483 266 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 PRAMEF6Q5VXH4 476 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 GGNBP1Q5YKI7 109 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 ZNF880Q6PDB4 577 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 GFRALQ6UXV0 394 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 SCARB1Q8WTV0 552 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 MRPL24Q96A35 216 aaKnown RBP17.53■□□□□ 0.4
USP39-203ENST00000409470 SPEF1Q9Y4P9 236 aa17.53■□□□□ 0.4
USP39-203ENST00000409470 H0YIZ8 118 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 H7C1Q1 480 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 PET100P0DJ07 73 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 S100A10P60903 97 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 UBA52P62987 128 aaKnown RBP17.52■□□□□ 0.4
USP39-203ENST00000409470 RAB32Q13637 225 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 PRSS54Q6PEW0 395 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 C11orf53Q8IXP5 236 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 OR4A4PQ8NGN8 299 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 UFSP2Q9NUQ7 469 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 TREM2Q9NZC2 230 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms