RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 DGCR2P98153 550 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 GRK1Q15835 563 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 LRRC10Q5BKY1 277 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 SHEQ5VZ18 495 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 STUMQ69YW2 141 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 SIGIRRQ6IA17 410 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 CLEC2AQ6UVW9 174 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 DCDC5Q6ZRR9 648 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 GDPD3Q7L5L3 318 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 NLRC3Q7RTR2 1065 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 TGIF2LYQ8IUE0 185 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 BPIFB2Q8N4F0 458 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 OR52I2Q8NH67 350 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 ANGPTL6Q8NI99 470 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 NUDCD2Q8WVJ2 157 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 ST8SIA4Q92187 359 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 GCDHQ92947 438 aaPredicted RBP11.89□□□□□ -0.51
SKA1-202ENST00000398452 COX4I2Q96KJ9 171 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 CCL13Q99616 98 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 CHST6Q9GZX3 395 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 FAM234AQ9H0X4 552 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 DCAF16Q9NXF7 216 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 ING3Q9NXR8 418 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 AK3Q9UIJ7 227 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 MGAT4AQ9UM21 535 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 DYSFO75923 2080 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 CSMD2Q7Z408 3487 aa11.89□□□□□ -0.51
SKA1-202ENST00000398452 IGKV1D-17A0A075B6S4 117 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 TRAV24A0A0B4J272 114 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 TMEM30CPA0ZSE6 113 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 MEIS3P1A6NDR6 274 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.88□□□□□ -0.51
SKA1-202ENST00000398452 MGST3O14880 152 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 LY6HO94772 140 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 FSTL3O95633 263 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 DTYMKP23919 212 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 GDNFP39905 211 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 ATXN7L3Q14CW9 347 aaPredicted RBP11.88□□□□□ -0.51
SKA1-202ENST00000398452 ZMYND11Q15326 602 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 AVPI1Q5T686 147 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 CD177Q8N6Q3 437 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 GPX8Q8TED1 209 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 PERPQ96FX8 193 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 SDSLQ96GA7 329 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 PIMREGQ9BSJ6 248 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 ST6GALNAC5Q9BVH7 336 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 ZNF286AQ9HBT8 521 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 KCNIP1Q9NZI2 227 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 MTFP1Q9UDX5 166 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 MIOXQ9UGB7 285 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 TRAPPC2LQ9UL33 140 aa11.88□□□□□ -0.51
SKA1-202ENST00000398452 CHD3Q12873 2000 aaKnown RBP11.87□□□□□ -0.51
SKA1-202ENST00000398452 HIVEP1P15822 2718 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 MEIOCA2RUB1 952 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 POM121CA8CG34 1229 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 SIGLEC5O15389 551 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 NDUFS7O75251 213 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 RP2O75695 350 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 RPS2P15880 293 aaKnown RBP11.87□□□□□ -0.51
SKA1-202ENST00000398452 NDUFB7P17568 137 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 AMY2BP19961 511 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 DSCR9P59020 149 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 TAS2R19P59542 299 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 ARPC4P59998 168 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 HOXA4Q00056 320 aaPredicted RBP11.87□□□□□ -0.51
SKA1-202ENST00000398452 EDDM3AQ14507 147 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 BAK1Q16611 211 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 TMEM155Q4W5P6 130 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 KRBOX4Q5JUW0 171 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 ATPAF1Q5TC12 328 aaPredicted RBP11.87□□□□□ -0.51
SKA1-202ENST00000398452 ZNF788Q6ZQV5 615 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 MOB1BQ7L9L4 216 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 FAM168AQ92567 244 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 TMEM246Q9BRR3 403 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 TMEM165Q9HC07 324 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 RAB9BQ9NP90 201 aa11.87□□□□□ -0.51
SKA1-202ENST00000398452 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
SKA1-202ENST00000398452 RAI1Q7Z5J4 1906 aaPredicted RBP11.86□□□□□ -0.51
SKA1-202ENST00000398452 MEIKINA0A087WXM9 373 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 KIR2DS1A0A191URI9 304 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 LINC00854A0A1B0GVQ3 168 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 A0A1W2PQ09 198 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 K7N7A8 449 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 NDUFS8O00217 210 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 ORC5O43913 435 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 IGHV2-70P01814 119 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 IGHV4-39P01824 125 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 TK1P04183 234 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 CSN2P05814 226 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 HEXAP06865 529 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 KIR2DS4P43632 304 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 OR3A3P47888 321 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 EDDM3BP56851 147 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 KIR2DS1Q14954 304 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 CHRFAM7AQ494W8 412 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 ACTBL2Q562R1 376 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 OLFML2AQ68BL7 652 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 MZT2BQ6NZ67 158 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 ZNRF1Q8ND25 227 aa11.86□□□□□ -0.51
SKA1-202ENST00000398452 OR4S1Q8NGB4 309 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms