RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PPIL3Q9H2H8 161 aaKnown RBP6.53□□□□□ -1.36
SCFD1-202ENST00000396629 IDI2-AS1Q9NZ38 188 aa6.53□□□□□ -1.36
SCFD1-202ENST00000396629 VSIG4Q9Y279 399 aa6.53□□□□□ -1.36
SCFD1-202ENST00000396629 GSTK1Q9Y2Q3 226 aa6.53□□□□□ -1.36
SCFD1-202ENST00000396629 IGHV1-3A0A0C4DH29 117 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 MAGEA13PA6NCF6 341 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 MAGEB4O15481 346 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 IGHV3-7P01780 117 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 RBP2P50120 134 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 GK3PQ14409 553 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 SRSF7Q16629 238 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 ZNF322Q6U7Q0 402 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 OR2T10Q8NGZ9 312 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 IL17DQ8TAD2 202 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 GIPC3Q8TF64 312 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 LEAP2Q969E1 77 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 S1PR3Q99500 378 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 HSPB9Q9BQS6 159 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 OSBPL10Q9BXB5 764 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 KLK15Q9H2R5 256 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 NCOR1P1Q9H4R4 102 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 MAGIXQ9H6Y5 334 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 PLEKHA1Q9HB21 404 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 KRT84Q9NSB2 600 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 CHCHD3Q9NX63 227 aaKnown RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 CALYQ9NYX4 217 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 MRM2Q9UI43 246 aaKnown RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 FRAS1Q86XX4 4008 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 TCRBV5S2A0A599 114 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 RBMY1BA6NDE4 496 aaKnown RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 RBMY1EA6NEQ0 496 aaKnown RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 NPIPB11E5RHQ5 1161 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 SLC33A1O00400 549 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 SYT7O43581 403 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 SASH3O75995 380 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 KDM4BO94953 1096 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 SERPINA3P01011 423 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 GAPDHP04406 335 aaKnown RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 RBMY1DP0C7P1 496 aaKnown RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 PPIFP30405 207 aaKnown RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 KIR3DL2P43630 455 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 ISL1P61371 349 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 PDZK1IP1Q13113 114 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 FAM53AQ6NSI3 398 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 ACSM6Q6P461 480 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 PLEKHG7Q6ZR37 379 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 MOB3BQ86TA1 216 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 CATSPERDQ86XM0 798 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 PGAM4Q8N0Y7 254 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 CHST4Q8NCG5 386 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 DLX4Q92988 240 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-202ENST00000396629 ST6GALNAC6Q969X2 333 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 C10orf35Q96D05 121 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 MNTQ99583 582 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 RASL11BQ9BPW5 248 aa6.52□□□□□ -1.37
SCFD1-202ENST00000396629 IGHV3-72A0A0B4J1Y9 119 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 IGKV1-9A0A0C4DH69 117 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 IGKV1-12A0A0C4DH73 117 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 HSD17B6O14756 317 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 IL1AP01583 271 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 IGKV1D-12P01611 117 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 IFNA6P05013 189 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 OR5H8P0DN80 308 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 OSMP13725 252 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 ZNF44P15621 663 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 ATP6V1B2P21281 511 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 CD1BP29016 333 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 MTNR1BP49286 362 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 ZP1P60852 638 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 CXCR4P61073 352 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 SPATS1Q496A3 300 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 CYP2R1Q6VVX0 501 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 HDXQ7Z353 690 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 OR10A7Q8NGE5 316 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 OR8H1Q8NGG4 311 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 OR13A1Q8NGR1 328 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 PP6455Q8WZ26 134 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 CNN2Q99439 309 aaKnown RBP6.51□□□□□ -1.37
SCFD1-202ENST00000396629 GHITMQ9H3K2 345 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 RHOFQ9HBH0 211 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 SLC25A19Q9HC21 320 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 ING3Q9NXR8 418 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 ACTR3BQ9P1U1 418 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 PCLOQ9Y6V0 5065 aa6.51□□□□□ -1.37
SCFD1-202ENST00000396629 H3BSH0 61 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 MOSP00540 346 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 IGLV1-40P01703 118 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 C21orf33P30042 268 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-202ENST00000396629 HTR1FP30939 366 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 SOX6P35712 828 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 GLP1RP43220 463 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 GNG10P50151 68 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 SLURP1P55000 103 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 MTCP1P56278 107 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 GABPB1Q06547 395 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-202ENST00000396629 SCN1BQ07699 218 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 BNIP1Q12981 228 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 ATXN7L3Q14CW9 347 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-202ENST00000396629 HAGHQ16775 308 aa6.5□□□□□ -1.37
SCFD1-202ENST00000396629 ODF4Q2M2E3 257 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms