RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 A6NNC1 897 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 F5H5P2 479 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 SLC22A5O76082 557 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 CD8AP01732 235 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 ERVK11-1P61568 191 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 DCAF12L2Q5VW00 463 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 VHLLQ6RSH7 139 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 MAFIPQ8WZ33 124 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 RTBDNQ9BSG5 229 aaPredicted RBP12.8□□□□□ -0.36
SCAF11-204ENST00000395454 SPACA1Q9HBV2 294 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 SPEF1Q9Y4P9 236 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 OR5H14A6NHG9 310 aa12.79□□□□□ -0.36
SCAF11-204ENST00000395454 GOSR2O14653 212 aa12.79□□□□□ -0.36
SCAF11-204ENST00000395454 ATP6V1G1O75348 118 aa12.79□□□□□ -0.36
SCAF11-204ENST00000395454 PLAUP00749 431 aa12.79□□□□□ -0.36
SCAF11-204ENST00000395454 CD34P28906 385 aa12.79□□□□□ -0.36
SCAF11-204ENST00000395454 IL13RA1P78552 427 aa12.79□□□□□ -0.36
SCAF11-204ENST00000395454 MBNL2Q5VZF2 373 aaKnown RBP12.79□□□□□ -0.36
SCAF11-204ENST00000395454 Q8IYB0 196 aa12.79□□□□□ -0.36
SCAF11-204ENST00000395454 ATP23Q9Y6H3 246 aa12.79□□□□□ -0.36
SCAF11-204ENST00000395454 CSMD2Q7Z408 3487 aa12.79□□□□□ -0.36
SCAF11-204ENST00000395454 TRBV6-6A0A0A6YYG2 114 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 POM121CA8CG34 1229 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 HMSDA8MTL9 139 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 SHISA9B4DS77 424 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 SDCBPO00560 298 aaPredicted RBP12.78□□□□□ -0.36
SCAF11-204ENST00000395454 RPS2P15880 293 aaKnown RBP12.78□□□□□ -0.36
SCAF11-204ENST00000395454 MPV17P39210 176 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 NPY4RP50391 375 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 LGALSLQ3ZCW2 172 aaPredicted RBP12.78□□□□□ -0.36
SCAF11-204ENST00000395454 UXS1Q8NBZ7 420 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 PHB2Q99623 299 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 ADAT1Q9BUB4 502 aaKnown RBP12.78□□□□□ -0.36
SCAF11-204ENST00000395454 CHIAQ9BZP6 476 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 NECAP2Q9NVZ3 263 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 PURGQ9UJV8 347 aaKnown RBP12.78□□□□□ -0.36
SCAF11-204ENST00000395454 POLDIP2Q9Y2S7 368 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 OR5H8P0DN80 308 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 LOXP28300 417 aaPredicted RBP12.78□□□□□ -0.36
SCAF11-204ENST00000395454 ARPC4P59998 168 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 SUPT4H1P63272 117 aaKnown RBP12.78□□□□□ -0.36
SCAF11-204ENST00000395454 NDUFA5Q16718 116 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 ALKBH6Q3KRA9 238 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 OR8G5Q8NG78 346 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 NEUROG1Q92886 237 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 WDR89Q96FK6 387 aaPredicted RBP12.78□□□□□ -0.36
SCAF11-204ENST00000395454 NRIP2Q9BQI9 281 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 TLNRD1Q9H1K6 362 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 HEXA-AS1Q9H8Q6 139 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 ZNF286AQ9HBT8 521 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 IL36RNQ9UBH0 155 aa12.78□□□□□ -0.36
SCAF11-204ENST00000395454 NOS1APO75052 506 aaPredicted RBP12.77□□□□□ -0.37
SCAF11-204ENST00000395454 SFT2D2O95562 160 aa12.77□□□□□ -0.37
SCAF11-204ENST00000395454 FAM58AQ8N1B3 248 aa12.77□□□□□ -0.37
SCAF11-204ENST00000395454 NUP37Q8NFH4 326 aa12.77□□□□□ -0.37
SCAF11-204ENST00000395454 GRPEL2Q8TAA5 225 aa12.77□□□□□ -0.37
SCAF11-204ENST00000395454 DYRK2Q92630 601 aa12.77□□□□□ -0.37
SCAF11-204ENST00000395454 TMEM204Q9BSN7 226 aa12.77□□□□□ -0.37
SCAF11-204ENST00000395454 LIME1Q9H400 295 aa12.77□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF442Q9H7R0 627 aa12.77□□□□□ -0.37
SCAF11-204ENST00000395454 FZR1Q9UM11 496 aa12.77□□□□□ -0.37
SCAF11-204ENST00000395454 SIX6O95475 246 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 CTSDP07339 412 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-204ENST00000395454 PGA5P0DJD9 388 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 GLRXP35754 106 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 SNRPD2P62316 118 aaKnown RBP12.76□□□□□ -0.37
SCAF11-204ENST00000395454 NKX6-1P78426 367 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF154Q13106 437 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 SHEQ5VZ18 495 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 RGS7BPQ6MZT1 257 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-204ENST00000395454 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 SCCPDHQ8NBX0 429 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 RIMS4Q9H426 269 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-204ENST00000395454 MLNRO43193 412 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 RHBDL1O75783 438 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 AKR1C4P17516 323 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 PRKACAP17612 351 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 RPS23P62266 143 aaKnown RBP12.76□□□□□ -0.37
SCAF11-204ENST00000395454 IKZF1Q13422 519 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF2Q9BSG1 426 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-204ENST00000395454 HES4Q9HCC6 221 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 Q9N2K0 584 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 CISD1Q9NZ45 108 aaKnown RBP12.76□□□□□ -0.37
SCAF11-204ENST00000395454 TREM2Q9NZC2 230 aa12.76□□□□□ -0.37
SCAF11-204ENST00000395454 TRAV24A0A0B4J272 114 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 A0A1W2PPR1 153 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 FABP6P51161 128 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 UCP3P55916 312 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF146Q15072 292 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 PDCD1Q15116 288 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF718Q3SXZ3 478 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF672Q499Z4 452 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-204ENST00000395454 HIST2H2BCQ6DN03 193 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 Q6P435 159 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF880Q6PDB4 577 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 C11orf88Q6PI97 169 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 ZNF767PQ75MW2 155 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 GAPTQ8N292 157 aa12.75□□□□□ -0.37
SCAF11-204ENST00000395454 SPERTQ8NA61 448 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms