RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 GPR37O15354 613 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 GATCO43716 136 aaKnown RBP17.75■□□□□ 0.43
CLK3-202ENST00000395066 SRD5A2P31213 254 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 FUT6P51993 359 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 PMS2CLQ68D20 193 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 SLAMF9Q96A28 289 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 SLC7A10Q9NS82 523 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 YIF1AO95070 293 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 HOXA5P20719 270 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 BCL3P20749 454 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 ITGA3P26006 1051 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 SRYQ05066 204 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 CCDC54Q8NEL0 328 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 SNIP1Q8TAD8 396 aaKnown RBP17.74■□□□□ 0.43
CLK3-202ENST00000395066 PAPOLGQ9BWT3 736 aaKnown RBP17.74■□□□□ 0.43
CLK3-202ENST00000395066 FGF23Q9GZV9 251 aaPredicted RBP17.74■□□□□ 0.43
CLK3-202ENST00000395066 DMRT1Q9Y5R6 373 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 AHCTF1Q8WYP5 2266 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 C3orf85A0A1B0GTC6 90 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 CDRT15L2A8MXV6 281 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 WRBO00258 174 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 GNRHRP30968 328 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 EWSR1Q01844 656 aaKnown RBP eCLIP17.74■□□□□ 0.433e-7■□□□□ 11.1
CLK3-202ENST00000395066 GNMTQ14749 295 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 KRTAP27-1Q3LI81 207 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 MUCL1Q96DR8 90 aa17.74■□□□□ 0.43
CLK3-202ENST00000395066 URB1O60287 2271 aaKnown RBP17.73■□□□□ 0.43
CLK3-202ENST00000395066 SCTP09683 121 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 FOXG1P55316 489 aaPredicted RBP17.73■□□□□ 0.43
CLK3-202ENST00000395066 OR4D5Q8NGN0 318 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 SYT3Q9BQG1 590 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 ZNF816-ZNF321PA0A0X1KG74 233 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 IGSF23A1L1A6 192 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 MPPED1O15442 326 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 FUT3P21217 361 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 GDF1P27539 372 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 CCL20P78556 96 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 OR8B8Q15620 311 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 OR2B11Q5JQS5 317 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 OR2V1Q8NHB1 315 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 EXTL1Q92935 676 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 BOD1Q96IK1 185 aa17.73■□□□□ 0.43
CLK3-202ENST00000395066 RBFOX3A6NFN3 312 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 YKT6O15498 198 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 SSSCA1O60232 199 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 PDGFBP01127 241 aaPredicted RBP17.72■□□□□ 0.43
CLK3-202ENST00000395066 RD3LP0DJH9 198 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 HIKESHIQ53FT3 197 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 CXorf66Q5JRM2 361 aaPredicted RBP17.72■□□□□ 0.43
CLK3-202ENST00000395066 TBC1D26Q86UD7 250 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 OR56B2PQ8NGI1 322 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 OR2G3Q8NGZ4 309 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 ADGRG7Q96K78 797 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 MMP24Q9Y5R2 645 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 DOCK10Q96BY6 2186 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 IGKV1D-13A0A0B4J2D9 117 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 TNFSF12O43508 249 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 IGKV1-13P0DP09 117 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 SMOC1Q9H4F8 434 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 PARPBPQ9NWS1 579 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 TMED3Q9Y3Q3 217 aa17.72■□□□□ 0.43
CLK3-202ENST00000395066 MMP7P09237 267 aaPredicted RBP17.71■□□□□ 0.43
CLK3-202ENST00000395066 HAAOP46952 286 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 CDX1P47902 265 aaPredicted RBP17.71■□□□□ 0.43
CLK3-202ENST00000395066 GPM6AP51674 278 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 ZNF600Q6ZNG1 722 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 ZNF818PQ6ZRF7 136 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 PPP1R32Q7Z5V6 425 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 ZFP62Q8NB50 900 aaPredicted RBP17.71■□□□□ 0.43
CLK3-202ENST00000395066 HLA-CQ95604 372 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 UBE2J1Q9Y385 318 aaPredicted RBP17.71■□□□□ 0.43
CLK3-202ENST00000395066 ZNF727A8MUV8 499 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 H3BQ15 152 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 CYC1P08574 325 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 ZNF266Q14584 549 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 IGFBP7Q16270 282 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 ABLIM2Q6H8Q1 611 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 SPINK14Q6IE38 97 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 OR2C3Q8N628 320 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 TMEM217Q8N7C4 229 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 TMEM171Q8WVE6 324 aa17.71■□□□□ 0.43
CLK3-202ENST00000395066 UNKLQ9H9P5 680 aaKnown RBP17.71■□□□□ 0.43
CLK3-202ENST00000395066 IFITM10A6NMD0 228 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 ZNF729A6NN14 1252 aaPredicted RBP17.7■□□□□ 0.42
CLK3-202ENST00000395066 HSD17B6O14756 317 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 CST7O76096 145 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 HLA-HP01893 362 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 ATP6V0CP27449 155 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 NDUFA6P56556 154 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 GAPTQ8N292 157 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 RAB39BQ96DA2 213 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 SGCZQ96LD1 299 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 NOSIPQ9Y314 301 aaKnown RBP17.7■□□□□ 0.42
CLK3-202ENST00000395066 PCSK5Q92824 1860 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 ZNF503-AS2A6NEH8 195 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 NTN3O00634 580 aaPredicted RBP17.7■□□□□ 0.42
CLK3-202ENST00000395066 ADAM20O43506 726 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 CELA3AP09093 270 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 CEBPGP53567 150 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 ZFP36L1Q07352 338 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms