RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 TMEM14DPA8MWL7 114 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 SNRPBP14678 240 aaKnown RBP9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 EFNB2P52799 333 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 RPS27AP62979 156 aaKnown RBP9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 QRFPP83859 136 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 NHLRC3Q5JS37 347 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 SIGIRRQ6IA17 410 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 CLVS1Q8IUQ0 354 aaPredicted RBP9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 LY6G5BQ8NDX9 201 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 PLPPR1Q8TBJ4 325 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 DYRK2Q92630 601 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 COQ2Q96H96 371 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 KIF25Q9UIL4 384 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 MEIKINA0A087WXM9 373 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 TRBV23-1A0A0A0MS06 115 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 TMEM272A0A1B0GTI8 110 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 A0A1W2PRD5 423 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 A0A1W2PRF3 423 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 A0A1W2PRM7 423 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 J3QLI3 93 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 CRLF1O75462 422 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 IGHV4-38-2P0DP08 117 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 RPL5P46777 297 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 SERPINB10P48595 397 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 VEGFCP49767 419 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 P2RX3P56373 397 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 MPV17LQ2QL34 196 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 BRD3OSQ6XYD6 125 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 ZNF782Q6ZMW2 699 aaPredicted RBP9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 C6orf201Q7Z4U5 140 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 BARHL1Q9BZE3 327 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 LPAR5Q9H1C0 372 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 A0A0A6YYD4 124 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 MCRIP1C9JLW8 97 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 SOCS1O15524 211 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 SRD5A1P18405 259 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 OMGP23515 440 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 BLVRBP30043 206 aaPredicted RBP9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 CTF1Q16619 201 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 VMO1Q7Z5L0 202 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 Q8N7P7 452 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 NANPQ8TBE9 248 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 CCDC107Q8WV48 283 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 LHX4Q969G2 390 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 TBX15Q96SF7 602 aa9.64□□□□□ -0.87
DEPDC4-202ENST00000378244 ANK3Q12955 4377 aaKnown RBP9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 A0A075B6Q4 140 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 hADV38S2A0JD32 116 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 MMP9P14780 707 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 FUT3P21217 361 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 KLRD1Q13241 179 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 KLF17Q5JT82 389 aaPredicted RBP9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 TCF23Q7RTU1 214 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 ANKRD13BQ86YJ7 626 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 CMTM4Q8IZR5 234 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 C8orf46Q8TAG6 207 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 UBALD1Q8TB05 177 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 NEDD4LQ96PU5 975 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 URM1Q9BTM9 101 aaKnown RBP9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 FAAP24Q9BTP7 215 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 SIRPDQ9H106 197 aa9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 SEBOXQ9HB31 216 aaPredicted RBP9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 SOX21Q9Y651 276 aaPredicted RBP9.63□□□□□ -0.87
DEPDC4-202ENST00000378244 ODAMA1E959 279 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 GABARAPO95166 117 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 GLP1RP43220 463 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 C11orf91Q3C1V1 193 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 LINC00596Q86U02 117 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 NDNFQ8TB73 568 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 LGALS14Q8TCE9 139 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 MRGPRDQ8TDS7 321 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 ZMAT3Q9HA38 289 aaKnown RBP9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 PLEKHJ1Q9NW61 149 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 TRGV10A0A0A0MS01 117 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM172BPA6NC97 362 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 PDCD6O75340 191 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 CSN2P05814 226 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 ZNF728P0DKX0 622 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 BLMHQ13867 455 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 MOGAT2Q3SYC2 334 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 RUSC1-AS1Q66K80 236 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 OR2W3Q7Z3T1 314 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 C11orf42Q8N5U0 333 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 OR13A1Q8NGR1 328 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 OR5H6Q8NGV6 325 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 OR4K15Q8NH41 348 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 RFESDQ8TAC1 157 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 UPRTQ96BW1 309 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 ZNF714Q96N38 554 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 SULT4A1Q9BR01 284 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 OCEL1Q9H607 264 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 SPACA1Q9HBV2 294 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 TMEM160Q9NX00 188 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 ETAA1Q9NY74 926 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 KPTNQ9Y664 436 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 ATRQ13535 2644 aa9.62□□□□□ -0.87
DEPDC4-202ENST00000378244 A0A1W2PPH5 198 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 CCDC160A6NGH7 325 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 LDLRAD4O15165 306 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 LTC4SQ16873 150 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms