RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 WNT5BQ9H1J7 359 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 C19orf67A6NJJ6 358 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 TNFSF11O14788 317 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 IFNA10P01566 189 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 EPHA8P29322 1005 aaPredicted RBP14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 FOXL2NBQ6ZUU3 175 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 ZIC4Q8N9L1 334 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 ABHD5Q8WTS1 349 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 DUSP23Q9BVJ7 150 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 PROK2Q9HC23 129 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 WSB1Q9Y6I7 421 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 A0A087WZY1 265 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 OMGP23515 440 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 ZNF133P52736 654 aaPredicted RBP14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 OR2C3Q8N628 320 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 FRZBQ92765 325 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 MSI2Q96DH6 328 aaKnown RBP14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 SLC2A9Q9NRM0 540 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 HSF4Q9ULV5 492 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 SHANK1Q9Y566 2161 aa14.36□□□□□ -0.11
PCDHA1-201ENST00000378133 A0A0J9YW62 118 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 ATXN7O15265 892 aaPredicted RBP14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 SCAF4O95104 1147 aaKnown RBP14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 VAMP5O95183 116 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 LIFP15018 202 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 ICAM4Q14773 271 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 Q6ZSR3 168 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 MAML2Q8IZL2 1156 aaPredicted RBP14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 OR8G5Q8NG78 346 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 OR10AD1Q8NGE0 317 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 DYRK2Q92630 601 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 METTL9Q9H1A3 318 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 FOXD3Q9UJU5 478 aaPredicted RBP14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 IGKV1-27A0A075B6S5 117 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 PHF1O43189 567 aaPredicted RBP14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 DSCR4P56555 118 aaPredicted RBP14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 C4orf17Q53FE4 359 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 CDCP2Q5VXM1 449 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 M1APQ8TC57 530 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 C10orf35Q96D05 121 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 SYT3Q9BQG1 590 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 C2orf88Q9BSF0 95 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 DKKL1Q9UK85 242 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 CCDC187A0A096LP49 1063 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 FAM221AA4D161 298 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 HSPA12AO43301 675 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 HSPB1P04792 205 aaKnown RBP14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 PATE4P0C8F1 98 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 CXCL12P48061 93 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 AKR1C8PQ5T2L2 129 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 OR4D5Q8NGN0 318 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 OR11L1Q8NGX0 322 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 FAM210BQ96KR6 192 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 ANGPTL4Q9BY76 406 aa14.35□□□□□ -0.11
PCDHA1-201ENST00000378133 IGHV1-45A0A0A0MS14 117 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 K7ESF4 209 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 FAM27BQ5VT28 67 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 ZNF774Q6NX45 483 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 SLC22A25Q6T423 547 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 MEX3BQ6ZN04 569 aaKnown RBP14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 SLC35E3Q7Z769 313 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 PACRGQ96M98 296 aaPredicted RBP14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 SRXN1Q9BYN0 137 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 MRPL37Q9BZE1 423 aaKnown RBP14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 SLC7A11Q9UPY5 501 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 PTRH2Q9Y3E5 179 aaKnown RBP14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 DMDP11532 3685 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 FREM2Q5SZK8 3169 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 ZNF506Q5JVG8 444 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 SLC35G3Q8N808 338 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 CLDN23Q96B33 292 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 TCFL5Q9UL49 500 aa14.34□□□□□ -0.11
PCDHA1-201ENST00000378133 IGSF23A1L1A6 192 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 MBP02144 154 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 LCATP04180 440 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 UMODP07911 640 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 NTF4P34130 210 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 NOVA1P51513 510 aaKnown RBP14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 RPL23AP62750 156 aaKnown RBP14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 SAP25Q8TEE9 199 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 IMMP1LQ96LU5 166 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 SMOC1Q9H4F8 434 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 LOC102723996A0A087X1L8 192 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 SMCO3A2RU48 225 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 CRYGSP22914 178 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 IL2RGP31785 369 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 RAB4BP61018 213 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 RPP30P78346 268 aaKnown RBP14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 HLA-DRB3P79483 266 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 MRPS34P82930 218 aaKnown RBP14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 P4HA3Q7Z4N8 544 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 SUMF1Q8NBK3 374 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 TMEM171Q8WVE6 324 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 SPSB1Q96BD6 273 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 CRLF2Q9HC73 371 aa14.33□□□□□ -0.12
PCDHA1-201ENST00000378133 GEMIN2O14893 280 aaKnown RBP14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 PITX3O75364 302 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 PDCD1Q15116 288 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 PIGYQ3MUY2 71 aa14.32□□□□□ -0.12
PCDHA1-201ENST00000378133 COX6A1P12074 109 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms