RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CSF3P09919 207 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR4A8P0C604 315 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 HMOX2P30519 316 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 LCN1P31025 176 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 PLP1P60201 277 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 SKP2Q13309 424 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 HERPUD1Q15011 391 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 MAPK14Q16539 360 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 HIKESHIQ53FT3 197 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 C1orf94Q6P1W5 598 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 RNASEKQ6P5S7 137 aaKnown RBP3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 TIFABQ6ZNK6 161 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 LRRC74BQ6ZQY2 392 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 MTERF4Q7Z6M4 381 aaKnown RBP3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 ERI1Q8IV48 349 aaKnown RBP3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 COX18Q8N8Q8 333 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 FNDC5Q8NAU1 212 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 CLHC1Q8NHS4 586 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 L3HYPDHQ96EM0 354 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 RACGAP1Q9H0H5 632 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 PIGUQ9H490 435 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 METTL17Q9H7H0 456 aaPredicted RBP3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 CTPS2Q9NRF8 586 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 KCNIP1Q9NZI2 227 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 PYCARDQ9ULZ3 195 aa3.9□□□□□ -1.79
RNU4-39P-201ENST00000362455 RYR3Q15413 4870 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 EXPH5Q8NEV8 1989 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 RBMY1BA6NDE4 496 aaKnown RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 RBMY1EA6NEQ0 496 aaKnown RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 CCDC182A6NF36 153 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 CLDN24A6NM45 220 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 E9PBE3 544 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 AGPAT2O15120 278 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 EIF4E2O60573 245 aaKnown RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 RBMY1DP0C7P1 496 aaKnown RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 RBMY1A1P0DJD3 496 aaKnown RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 HPGDP15428 266 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 TBPP20226 339 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 KITLGP21583 273 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 COL8A2P25067 703 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 SRP14P37108 136 aaKnown RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 GLP1RP43220 463 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 VDAC2P45880 294 aaPredicted RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 IDH3GP51553 393 aaPredicted RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 CAV2P51636 162 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 DEFA6Q01524 100 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 CAV1Q03135 178 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 MERTKQ12866 999 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 SELENBP1Q13228 472 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF141Q15928 474 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF79Q15937 498 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 VPS26BQ4G0F5 336 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 CLEC6AQ6EIG7 209 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 IL34Q6ZMJ4 242 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 C19orf35Q6ZS72 473 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 SSX8Q7RTT4 187 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 HMGN2P46Q86SG4 172 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF546Q86UE3 836 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF786Q8N393 782 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 MMGT1Q8N4V1 131 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZDHHC22Q8N966 263 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR5D16Q8NGK9 328 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR9G1Q8NH87 305 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 SGMS2Q8NHU3 365 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 APH1AQ96BI3 265 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 MS4A4EQ96PG1 132 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 TSSK3Q96PN8 268 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 STACQ99469 402 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 SDF2Q99470 211 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 CDC42EP4Q9H3Q1 356 aaKnown RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 SLC25A22Q9H936 323 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 PLGRKTQ9HBL7 147 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 CA10Q9NS85 328 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 ACER3Q9NUN7 267 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 NOSIPQ9Y314 301 aaKnown RBP3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 CDH10Q9Y6N8 788 aa3.89□□□□□ -1.79
RNU4-39P-201ENST00000362455 PSMB11A5LHX3 300 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 GJE1A6NN92 205 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 LSM1O15116 133 aaKnown RBP3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 MRPL33O75394 65 aaKnown RBP3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 C6orf47O95873 294 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 SNRPAP09012 282 aaKnown RBP3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 CECR9P0C854 216 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF19P17023 458 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 VHLP40337 213 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 PPOXP50336 477 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 SERPINB9P50453 376 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 DLX1P56177 255 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 TAS2R19P59542 299 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 FUT5Q11128 374 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 ATP6AP1Q15904 470 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 C3orf33Q6P1S2 294 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 WDFY1Q8IWB7 410 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 RIMKLAQ8IXN7 391 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 C17orf78Q8N4C9 275 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 KRTCAP2Q8N6L1 136 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 CCNYL1Q8N7R7 359 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 C3orf56Q8N813 242 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms