RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 SNX22Q96L94 193 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 MRPS17Q9Y2R5 130 aaKnown RBP11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 IGHMP01871 453 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 IFI6P09912 130 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 PMP22Q01453 160 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 ENDOGQ14249 297 aaKnown RBP11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 ZNF266Q14584 549 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 C3AR1Q16581 482 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 NTNG2Q96CW9 530 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 WFIKKN1Q96NZ8 548 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 RBM14Q96PK6 669 aaKnown RBP11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 HDGFL3Q9Y3E1 203 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 TIMM10BQ9Y5J6 103 aa11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 TNRC18O15417 2968 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF21-201ENST00000296861 A0A1W2PQM1 296 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 RPS2P15880 293 aaKnown RBP11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 S100GP29377 79 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 RND3P61587 244 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 GFOD1Q9NXC2 390 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 METTL1Q9UBP6 276 aaKnown RBP11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 IGKV1-27A0A075B6S5 117 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 ZNF816-ZNF321PA0A0X1KG74 233 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 P2RY1P47900 373 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 WDR25Q64LD2 544 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 LHFPL1Q86WI0 220 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 ZNF808Q8N4W9 903 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 FGFBP3Q8TAT2 258 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 FOXB1Q99853 325 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 FAM234AQ9H0X4 552 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 A0A087WZY1 265 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 HNF1AP20823 631 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 LINC00696Q6ZRV3 163 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 MCEMP1Q8IX19 187 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 IL22RA1Q8N6P7 574 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 ZNF441Q8N8Z8 693 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 PSMF1Q92530 271 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 Q96M66 194 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 SRXN1Q9BYN0 137 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 DOK5Q9P104 306 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 ERRFI1Q9UJM3 462 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 USF3Q68DE3 2245 aa11.53□□□□□ -0.56
TNFRSF21-201ENST00000296861 IGKV1-12A0A0C4DH73 117 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 IGSF23A1L1A6 192 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 CXorf65A6NEN9 183 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 MPPED1O15442 326 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 MRPL33O75394 65 aaKnown RBP11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 IGKV1D-12P01611 117 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 IGHV3-13P01766 116 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 IGHV3-7P01780 117 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 TMEM187Q14656 261 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 ADPRHL1Q8NDY3 354 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 ZNF665Q9H7R5 613 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 PNRC2Q9NPJ4 139 aaKnown RBP11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 UFSP2Q9NUQ7 469 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 TINAGQ9UJW2 476 aa11.52□□□□□ -0.56
TNFRSF21-201ENST00000296861 A0A0G2JMM0 328 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 A0A1W2PPB8 328 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 A0A1W2PRS3 328 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 KIR3DP1A8MWS1 328 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 PATE3B3GLJ2 98 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 ZNF732B4DXR9 585 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 TRAPPC2LH3BP13 241 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 YKT6O15498 198 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 DANCRP0C864 163 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 BCL3P20749 454 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 SUMO3P55854 103 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 FAM3AP98173 230 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 MEGF10Q96KG7 1140 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 SMCO3A2RU48 225 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 CD300LBA8K4G0 201 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 SIRPB1O00241 398 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 PRF1P14222 555 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 FUT3P21217 361 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 RPS23P62266 143 aaKnown RBP11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 HGFACQ04756 655 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 CXorf67Q86X51 503 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 MKXQ8IYA7 352 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 TMEM252Q8N6L7 170 aa11.52□□□□□ -0.57
TNFRSF21-201ENST00000296861 CACNA1HO95180 2353 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 PDCD6O75340 191 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 CLDN1O95832 211 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 SELEP16581 610 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 AGAP20933 346 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 CLDN15P56746 228 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 PSG4Q00888 419 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 LYPD6Q86Y78 171 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 HS3ST6Q96QI5 342 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 SPIN2AQ99865 258 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 SPIN2BQ9BPZ2 258 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 SLC25A31Q9H0C2 315 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 POMT1Q9Y6A1 747 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 CXCL12P48061 93 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 NFAM1Q8NET5 270 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 RBMXL1Q96E39 390 aaKnown RBP11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 POM121Q96HA1 1249 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 IGHV5-10-1A0A0J9YXX1 117 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 RNF224P0DH78 156 aa11.51□□□□□ -0.57
TNFRSF21-201ENST00000296861 CFPP27918 469 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms