RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 MBPP02686 304 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 H3F3AP84243 136 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 MPV17LQ2QL34 196 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF383Q8NA42 475 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 HLA-CQ95604 372 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 TWSG1Q9GZX9 223 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 C5orf66Q9H5L9 145 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 OPA3Q9H6K4 179 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 POMT1Q9Y6A1 747 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 A0A1W2PQD3 144 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 AQP7O14520 342 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 SH2D1BO14796 132 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 ACTL6AO96019 429 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 UNC119Q13432 240 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 IL13RA2Q14627 380 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 MTCH1Q9NZJ7 389 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 OSGIN2Q9Y236 505 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 ENSAO43768 121 aaKnown RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 ATP6V0CP27449 155 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 P2RY1P47900 373 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 ZNF816Q0VGE8 651 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 ENDOGQ14249 297 aaKnown RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 ADPRHL1Q8NDY3 354 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 FAM206AQ9NX38 181 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 OCIAD1Q9NX40 245 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 LIPGQ9Y5X9 500 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 IGKV1D-43A0A0B4J1Z2 117 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 AQP7P3A6NL99 342 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 TRDCB7Z8K6 153 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 TERTO14746 1132 aaKnown RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 CRYAAP02489 173 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 UBE2V2Q15819 145 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 BIVMQ86UB2 503 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 OR10V1Q8NGI7 309 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 GPR35Q9HC97 309 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 SH3BGRL2Q9UJC5 107 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 LOXL2Q9Y4K0 774 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 THSD7BQ9C0I4 1608 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 BCL3P20749 454 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 SULT1A2P50226 295 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 SRSF3P84103 164 aaKnown RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 COL13A1Q5TAT6 717 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 LRP11Q86VZ4 500 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 REG4Q9BYZ8 158 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 SH3BGRL3Q9H299 93 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 RIMS4Q9H426 269 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 SMOC1Q9H4F8 434 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 SLC2A9Q9NRM0 540 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 H0YIZ8 118 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 DSCR4P56555 118 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM50BP56557 158 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 RAC1P63000 192 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 RPP30P78346 268 aaKnown RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM241Q24JQ0 296 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 STPG1Q5TH74 334 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 NSUN5P2Q63ZY6 315 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 FAM58AQ8N1B3 248 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 CYB561D1Q8N8Q1 229 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 AURKAIP1Q9NWT8 199 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 FZR1Q9UM11 496 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 VSTM5A8MXK1 200 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 RUNX1Q01196 453 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 IL24Q13007 206 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 ALKBH6Q3KRA9 238 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 FAM209BQ5JX69 171 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 PPP1R35Q8TAP8 253 aa4.03□□□□□ -1.76
VPS13C-201ENST00000249837 RCC2Q9P258 522 aaKnown RBP4.03□□□□□ -1.76
VPS13C-201ENST00000249837 NUP210Q8TEM1 1887 aaPredicted RBP4.03□□□□□ -1.77
VPS13C-201ENST00000249837 BTBD17A6NE02 478 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 DVL1O14640 695 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 IGKV3-11P04433 115 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 OR8U8P0C7N1 319 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 DTYMKP23919 212 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 NAAAQ02083 359 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 SLC10A1Q14973 349 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 SNAI3Q3KNW1 292 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 BSCL2Q96G97 398 aaPredicted RBP4.03□□□□□ -1.77
VPS13C-201ENST00000249837 KCNK17Q96T54 332 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF251Q9BRH9 671 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 UCK1Q9HA47 277 aa4.03□□□□□ -1.77
VPS13C-201ENST00000249837 CALCRP30988 508 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 PPP1CCP36873 323 aaKnown RBP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 NOVA1P51513 510 aaKnown RBP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF345Q14585 488 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ACOT6Q3I5F7 207 aaPredicted RBP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF66Q6ZN08 573 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 OIT3Q8WWZ8 545 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 MRGPRFQ96AM1 343 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 SNX22Q96L94 193 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 GAPDHP04406 335 aaKnown RBP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 CXorf66Q5JRM2 361 aaPredicted RBP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 RNF126Q9BV68 326 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 RTL8AQ9BWD3 113 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 PARP11Q9NR21 331 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 A0A0J9YW62 118 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 SPINT2O43291 252 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 CCL11P51671 97 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 EWSR1Q01844 656 aaKnown RBP eCLIP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF90Q03938 601 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms