RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS30	YPL120W	MET7	Q08645	548 aa		4.31	□□□□□ -1.72
VPS30	YPL120W	OCT1	P35999	772 aa		4.3	□□□□□ -1.72
VPS30	YPL120W	YBR284W	P38150	797 aa		4.3	□□□□□ -1.72
VPS30	YPL120W	YBR184W	P38299	523 aa		4.3	□□□□□ -1.72
VPS30	YPL120W	KSP1	P38691	1029 aa	Known RBP	4.3	□□□□□ -1.72
VPS30	YPL120W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	not detected
VPS30	YPL120W	NDJ1	Q12366	352 aa		4.3	□□□□□ -1.72
VPS30	YPL120W	GCN1	P33892	2672 aa	Known RBP	4.3	□□□□□ -1.72
VPS30	YPL120W	GFA1	P14742	717 aa	Known RBP	4.29	□□□□□ -1.72
VPS30	YPL120W	PRP4	P20053	465 aa	Known RBP	4.29	□□□□□ -1.72
VPS30	YPL120W	SCT1	P32784	759 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	TDP1	P38319	544 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	PCL5	P38794	229 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	ALR2	P43553	858 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	YJL163C	P46996	555 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	ALD6	P54115	500 aa	Known RBP	4.29	□□□□□ -1.72
VPS30	YPL120W	AUS1	Q08409	1394 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	MPH2	P0CD99	609 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	CDC43	P18898	376 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	NGG1	P32494	702 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	PPZ2	P33329	710 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	AMA1	P50082	593 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	DSD1	P53095	428 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	ASI2	P53895	289 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	TAP42	Q04372	366 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	ALE1	Q08548	619 aa		4.29	□□□□□ -1.72
VPS30	YPL120W	KCC4	P25389	1037 aa		4.28	□□□□□ -1.72
VPS30	YPL120W	CYS3	P31373	394 aa	Known RBP	4.28	□□□□□ -1.72
VPS30	YPL120W	PZF1	P39933	429 aa		4.28	□□□□□ -1.72
VPS30	YPL120W	VAB2	P40003	282 aa		4.28	□□□□□ -1.72
VPS30	YPL120W	HCA4	P20448	770 aa	Known RBP	4.27	□□□□□ -1.73
VPS30	YPL120W	RPS7A	P26786	190 aa	Known RBP	4.27	□□□□□ -1.73
VPS30	YPL120W	YBR053C	P38235	358 aa		4.27	□□□□□ -1.73
VPS30	YPL120W	PFD1	P46988	109 aa		4.27	□□□□□ -1.73
VPS30	YPL120W	HAL9	Q12180	1030 aa		4.27	□□□□□ -1.73
VPS30	YPL120W	LYS14	P40971	790 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	UBR2	Q07963	1872 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	KIN3	P22209	435 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	BCS1	P32839	456 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	KEL1	P38853	1164 aa	Known RBP	4.26	□□□□□ -1.73
VPS30	YPL120W	HUL4	P40985	892 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	NIT3	P49954	291 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	RPT4	P53549	437 aa	Known RBP	4.26	□□□□□ -1.73
VPS30	YPL120W	NOG2	P53742	486 aa	Known RBP	4.26	□□□□□ -1.73
VPS30	YPL120W	DNM1	P54861	757 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	NRG1	Q03125	231 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	FMP25	Q08023	583 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	ENV7	Q12003	364 aa		4.26	□□□□□ -1.73
VPS30	YPL120W	SAK1	P38990	1142 aa		4.25	□□□□□ -1.73
VPS30	YPL120W	YIR042C	P40586	236 aa		4.25	□□□□□ -1.73
VPS30	YPL120W	VPS73	P53142	486 aa	Known RBP	4.25	□□□□□ -1.73
VPS30	YPL120W	MUS81	Q04149	632 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS30	YPL120W	UBX5	Q06682	500 aa		4.25	□□□□□ -1.73
VPS30	YPL120W	IRC13	Q08630	104 aa		4.25	□□□□□ -1.73
VPS30	YPL120W	YOR022C	Q12204	715 aa		4.25	□□□□□ -1.73
VPS30	YPL120W	YDR524C-B	Q3E6R4	66 aa		4.25	□□□□□ -1.73
VPS30	YPL120W	MSD1	P15179	658 aa	Known RBP	4.24	□□□□□ -1.73
VPS30	YPL120W	HIS7	P33734	552 aa	Known RBP	4.24	□□□□□ -1.73
VPS30	YPL120W	PET10	P36139	283 aa		4.24	□□□□□ -1.73
VPS30	YPL120W	RIX1	P38883	763 aa	Predicted RBP	4.24	□□□□□ -1.73
VPS30	YPL120W	SSY5	P47002	699 aa		4.24	□□□□□ -1.73
VPS30	YPL120W	TAH11	P47112	604 aa		4.24	□□□□□ -1.73
VPS30	YPL120W	UTP8	P53276	713 aa	Known RBP	4.24	□□□□□ -1.73
VPS30	YPL120W	EAF1	Q06337	982 aa		4.24	□□□□□ -1.73
VPS30	YPL120W	YLR415C	O13578	112 aa		4.23	□□□□□ -1.73
VPS30	YPL120W	PRC1	P00729	532 aa		4.23	□□□□□ -1.73
VPS30	YPL120W	MET6	P05694	767 aa	Known RBP	4.23	□□□□□ -1.73
VPS30	YPL120W	DAL7	P21826	554 aa		4.23	□□□□□ -1.73
VPS30	YPL120W	CBR1	P38626	284 aa	Known RBP	4.23	□□□□□ -1.73
VPS30	YPL120W	TUB1	P09733	447 aa	Known RBP	4.22	□□□□□ -1.73
VPS30	YPL120W	RGT1	P32862	1170 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	SAP190	P36123	1033 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	GGA2	P38817	585 aa	Known RBP	4.22	□□□□□ -1.73
VPS30	YPL120W	SPL2	P38839	148 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	RTR1	P40084	226 aa	Predicted RBP	4.22	□□□□□ -1.73
VPS30	YPL120W	HSV2	P50079	448 aa	Predicted RBP	4.22	□□□□□ -1.73
VPS30	YPL120W	RSC3	Q06639	885 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	SPO75	Q07798	868 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	HBN1	Q96VH4	193 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	SYN8	P31377	255 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	APL2	P36000	726 aa	Predicted RBP	4.22	□□□□□ -1.73
VPS30	YPL120W	PFA3	P42836	336 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	ERP6	P53198	216 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	IMO32	P53219	342 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	SSL2	Q00578	843 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	HIM1	Q06674	414 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	SGO1	Q08490	590 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	PSF3	Q12146	194 aa		4.22	□□□□□ -1.73
VPS30	YPL120W	LAT1	P12695	482 aa	Known RBP	4.21	□□□□□ -1.74
VPS30	YPL120W	POL3	P15436	1097 aa		4.21	□□□□□ -1.74
VPS30	YPL120W	MCM3	P24279	971 aa	Known RBP	4.21	□□□□□ -1.74
VPS30	YPL120W	ARE1	P25628	610 aa		4.21	□□□□□ -1.74
VPS30	YPL120W	ACA1	P39970	489 aa		4.21	□□□□□ -1.74
VPS30	YPL120W	RPL8B	P29453	256 aa	Known RBP	4.2	□□□□□ -1.74
VPS30	YPL120W	EUG1	P32474	517 aa		4.2	□□□□□ -1.74
VPS30	YPL120W	YIL166C	P40445	542 aa		4.2	□□□□□ -1.74
VPS30	YPL120W	TAD1	P53065	400 aa		4.2	□□□□□ -1.74
VPS30	YPL120W	LRS4	Q04087	347 aa	Known RBP	4.2	□□□□□ -1.74
VPS30	YPL120W	IOC4	Q04213	475 aa		4.2	□□□□□ -1.74
VPS30	YPL120W	MFB1	Q04922	465 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms