RNA–Protein interactions for RNA: YOL087C

DUF1, Transcript of Ubiquitin-binding protein of unknown function, yeast

Gene DUF1, Length 3,351 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DUF1	YOL087C	HOP1	P20050	605 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	FUN30	P31380	1131 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	DBF4	P32325	704 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	BUD2	P33314	1104 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	SEG2	P34250	1132 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	WHI3	P34761	661 aa	Known RBP	3.2	□□□□□ -1.9
DUF1	YOL087C	YKL077W	P36081	392 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	TIF4631	P39935	952 aa	Known RBP	3.2	□□□□□ -1.9
DUF1	YOL087C	CCT5	P40413	562 aa	Known RBP	3.2	□□□□□ -1.9
DUF1	YOL087C	INA22	P40576	216 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	GCV1	P48015	400 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	NNF2	P53253	936 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	TIM50	Q02776	476 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	TIF35	Q04067	274 aa	Known RBP	3.2	□□□□□ -1.9
DUF1	YOL087C	HLR1	Q04429	423 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	EST2	Q06163	884 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	TDA6	Q06466	467 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	APL4	Q12028	832 aa		3.2	□□□□□ -1.9
DUF1	YOL087C	PAR32	Q12515	295 aa	Known RBP	3.2	□□□□□ -1.9
DUF1	YOL087C	CTT1	P06115	562 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	MIS1	P09440	975 aa	Known RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	RSC6	P25632	483 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	TRK2	P28584	889 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	NTG1	P31378	399 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	RME1	P32338	300 aa	Known RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	RPN2	P32565	945 aa	Known RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	XRS2	P33301	854 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	DED81	P38707	554 aa	Known RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	MKT1	P40850	830 aa	Known RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	YJR039W	P47107	1121 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	SHE4	P51534	789 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	YNR068C	P53754	272 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	ECM9	Q02202	377 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	LCD1	Q04377	747 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	PEX15	Q08215	383 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	ARP7	Q12406	477 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	CDC16	P09798	840 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	MTF2	P10849	440 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	COX11	P19516	300 aa	Known RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	GSY1	P23337	708 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	MNE1	P24720	663 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	SPB1	P25582	841 aa	Predicted RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	NAM7	P30771	971 aa	Known RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	PEX32	P38292	413 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	REI1	P38344	393 aa	Predicted RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	YEL068C	P39977	110 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	EMP65	P40085	556 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	CCT7	P42943	550 aa	Known RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	PUS4	P48567	403 aa	Known RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	YPL107W	Q02873	248 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	YML119W	Q03208	357 aa		3.19	□□□□□ -1.9
DUF1	YOL087C	ECM38	Q05902	660 aa	Predicted RBP	3.19	□□□□□ -1.9
DUF1	YOL087C	YER152C	P10356	443 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	YCK2	P23292	546 aa	Known RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	MCM3	P24279	971 aa	Known RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	MLS1	P30952	554 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
DUF1	YOL087C	YKT6	P36015	200 aa	Known RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	ADD66	P36040	267 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	SLN1	P39928	1220 aa	Predicted RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	PRY1	P47032	299 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	BUD9	P53226	547 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	YGR045C	P53229	120 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	YNL247W	P53852	767 aa	Known RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	TRM8	Q12009	286 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	YIL002W-A	Q3E7Z5	69 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	SAC7	P17121	654 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	ASF2	P32448	525 aa	Predicted RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	SER1	P33330	395 aa	Known RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	MCM7	P38132	845 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	RTS1	P38903	757 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	SMC2	P38989	1170 aa	Known RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	HXT6	P39003	570 aa	Known RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	HXT7	P39004	570 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	KHA1	P40309	873 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	LYS4	P49367	693 aa	Predicted RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	RRT6	P53117	311 aa	Predicted RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	SLD3	P53135	668 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	YNR014W	P53719	212 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
DUF1	YOL087C	THI72	Q08579	599 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	ADF1	Q2V2Q1	113 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	LAT1	P12695	482 aa	Known RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	STE50	P25344	346 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	GYP6	P32806	458 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	YKU70	P32807	602 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	MCD4	P36051	919 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	DID4	P36108	232 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	ALG3	P38179	458 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	CCZ1	P38273	704 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	SHU2	P38957	223 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	STL1	P39932	569 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	YJL070C	P40361	888 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	PKP1	P40530	394 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	CAF16	P43569	289 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	SNF12	P53628	566 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	MFB1	Q04922	465 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	VID22	Q05934	901 aa		3.18	□□□□□ -1.9
DUF1	YOL087C	NBA1	Q08229	501 aa	Known RBP	3.18	□□□□□ -1.9
DUF1	YOL087C	FRE6	Q12473	712 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms