RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W AIM14P53109 570 aa4.33□□□□□ -1.72
PUB1YNL016W BTN2P53286 410 aa4.33□□□□□ -1.72
PUB1YNL016W ZDS2P54786 942 aa4.33□□□□□ -1.72
PUB1YNL016W GRX3Q03835 250 aa4.33□□□□□ -1.72
PUB1YNL016W RKM2Q03942 479 aa4.33□□□□□ -1.72
PUB1YNL016W UTP5Q04177 643 aaKnown RBP4.33□□□□□ -1.72
PUB1YNL016W UBX2Q04228 584 aa4.33□□□□□ -1.72
PUB1YNL016W PDS5Q04264 1277 aa4.33□□□□□ -1.72
PUB1YNL016W YKU80Q04437 629 aa4.33□□□□□ -1.72
PUB1YNL016W TDA9Q04545 1251 aa4.33□□□□□ -1.72
PUB1YNL016W ECM38Q05902 660 aaPredicted RBP4.33□□□□□ -1.72
PUB1YNL016W NBA1Q08229 501 aaKnown RBP4.33□□□□□ -1.72
PUB1YNL016W HFI1Q12060 488 aa4.33□□□□□ -1.72
PUB1YNL016W YPR027CQ12079 277 aa4.33□□□□□ -1.72
PUB1YNL016W HSH49Q99181 213 aaPredicted RBP4.33□□□□□ -1.72
PUB1YNL016W SEM1O94742 89 aa4.32□□□□□ -1.72
PUB1YNL016W FBP1P09201 348 aa4.32□□□□□ -1.72
PUB1YNL016W TY1A-LR4P0C2I8 440 aaKnown RBP4.32□□□□□ -1.72
PUB1YNL016W TY1A-DR6P0CX70 440 aa4.32□□□□□ -1.72
PUB1YNL016W TY1A-ER1P0CX71 440 aa4.32□□□□□ -1.72
PUB1YNL016W TY1A-LR2P0CX72 440 aa4.32□□□□□ -1.72
PUB1YNL016W TY1A-PLP0CX73 440 aa4.32□□□□□ -1.72
PUB1YNL016W TY1A-JR1P0CX74 440 aa4.32□□□□□ -1.72
PUB1YNL016W TY1A-LR3P0CX75 440 aa4.32□□□□□ -1.72
PUB1YNL016W TY1A-ML2P0CX76 440 aa4.32□□□□□ -1.72
PUB1YNL016W FUS1P11710 512 aa4.32□□□□□ -1.72
PUB1YNL016W MET8P15807 274 aa4.32□□□□□ -1.72
PUB1YNL016W AAC3P18238 307 aa4.32□□□□□ -1.72
PUB1YNL016W XRS2P33301 854 aa4.32□□□□□ -1.72
PUB1YNL016W EMC3P36039 253 aa4.32□□□□□ -1.72
PUB1YNL016W YKL077WP36081 392 aa4.32□□□□□ -1.72
PUB1YNL016W NCL1P38205 684 aaKnown RBP4.32□□□□□ -1.72
PUB1YNL016W YBR238CP38330 731 aaKnown RBP4.32□□□□□ -1.72
PUB1YNL016W NEM1P38757 446 aa4.32□□□□□ -1.72
PUB1YNL016W DAM1P53267 343 aa4.32□□□□□ -1.72
PUB1YNL016W RBG2P53295 368 aaKnown RBP4.32□□□□□ -1.72
PUB1YNL016W RPT4P53549 437 aaKnown RBP4.32□□□□□ -1.72
PUB1YNL016W TEP1P53916 434 aa4.32□□□□□ -1.72
PUB1YNL016W MOT3P54785 490 aaKnown RBP4.32□□□□□ -1.72
PUB1YNL016W DUS3Q06053 668 aaKnown RBP4.32□□□□□ -1.72
PUB1YNL016W MET7Q08645 548 aa4.32□□□□□ -1.72
PUB1YNL016W PGC1Q08959 321 aa4.32□□□□□ -1.72
PUB1YNL016W TY1A-GR1Q12085 440 aa4.32□□□□□ -1.72
PUB1YNL016W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.32□□□□□ -1.72
PUB1YNL016W TY1A-OLQ92392 440 aaKnown RBP4.32□□□□□ -1.72
PUB1YNL016W ADE8P04161 214 aa4.31□□□□□ -1.72
PUB1YNL016W RPS21AP0C0V8 87 aaKnown RBP4.31□□□□□ -1.72
PUB1YNL016W FUR1P18562 216 aaKnown RBP4.31□□□□□ -1.72
PUB1YNL016W ACE2P21192 770 aa4.31□□□□□ -1.72
PUB1YNL016W MIH1P23748 554 aa4.31□□□□□ -1.72
PUB1YNL016W PGS1P25578 521 aa4.31□□□□□ -1.72
PUB1YNL016W CDC48P25694 835 aaKnown RBP4.31□□□□□ -1.72
PUB1YNL016W MSH1P25846 959 aa4.31□□□□□ -1.72
PUB1YNL016W FUN30P31380 1131 aa4.31□□□□□ -1.72
PUB1YNL016W CCR4P31384 837 aaKnown RBP4.31□□□□□ -1.72
PUB1YNL016W CDC12P32468 407 aaKnown RBP4.31□□□□□ -1.72
PUB1YNL016W YRO2P38079 344 aa4.31□□□□□ -1.72
PUB1YNL016W SRP72P38688 640 aaKnown RBP4.31□□□□□ -1.72
PUB1YNL016W SPL2P38839 148 aa4.31□□□□□ -1.72
PUB1YNL016W TPA1P40032 644 aaKnown RBP4.31□□□□□ -1.72
PUB1YNL016W VPS53P47061 822 aa4.31□□□□□ -1.72
PUB1YNL016W PUS4P48567 403 aaKnown RBP4.31□□□□□ -1.72
PUB1YNL016W ATP22P50273 684 aaPredicted RBP4.31□□□□□ -1.72
PUB1YNL016W ZIP2P53061 704 aa4.31□□□□□ -1.72
PUB1YNL016W PCL10P53124 433 aa4.31□□□□□ -1.72
PUB1YNL016W ARC35P53731 342 aaKnown RBP4.31□□□□□ -1.72
PUB1YNL016W MRPL19P53875 158 aa4.31□□□□□ -1.72
PUB1YNL016W FCP1Q03254 732 aa4.31□□□□□ -1.72
PUB1YNL016W TLG1Q03322 224 aa4.31□□□□□ -1.72
PUB1YNL016W YDR286CQ05530 114 aa4.31□□□□□ -1.72
PUB1YNL016W HSP42Q12329 375 aa4.31□□□□□ -1.72
PUB1YNL016W ARP7Q12406 477 aa4.31□□□□□ -1.72
PUB1YNL016W HTS1P07263 546 aaKnown RBP4.3□□□□□ -1.72
PUB1YNL016W MTF2P10849 440 aa4.3□□□□□ -1.72
PUB1YNL016W RPC53P25441 422 aa4.3□□□□□ -1.72
PUB1YNL016W PDC6P26263 563 aaKnown RBP4.3□□□□□ -1.72
PUB1YNL016W MLS1P30952 554 aa4.3□□□□□ -1.72
PUB1YNL016W NGG1P32494 702 aa4.3□□□□□ -1.72
PUB1YNL016W OAF3P36023 863 aa4.3□□□□□ -1.72
PUB1YNL016W CCZ1P38273 704 aa4.3□□□□□ -1.72
PUB1YNL016W TDA3P38758 523 aa4.3□□□□□ -1.72
PUB1YNL016W CCT3P39077 534 aaKnown RBP4.3□□□□□ -1.72
PUB1YNL016W SPC72P39723 622 aa4.3□□□□□ -1.72
PUB1YNL016W KAP123P40069 1113 aaKnown RBP4.3□□□□□ -1.72
PUB1YNL016W JEM1P40358 645 aa4.3□□□□□ -1.72
PUB1YNL016W DPH1P40487 425 aaKnown RBP4.3□□□□□ -1.72
PUB1YNL016W AXL1P40851 1208 aa4.3□□□□□ -1.72
PUB1YNL016W BFA1P47113 574 aa4.3□□□□□ -1.72
PUB1YNL016W ASK10P48361 1146 aa4.3□□□□□ -1.72
PUB1YNL016W MTC3P53077 123 aa4.3□□□□□ -1.72
PUB1YNL016W YNL058CP53947 316 aa4.3□□□□□ -1.72
PUB1YNL016W YNL050CP53952 270 aa4.3□□□□□ -1.72
PUB1YNL016W TIM10P87108 93 aa4.3□□□□□ -1.72
PUB1YNL016W PRP42Q03776 544 aaKnown RBP4.3□□□□□ -1.72
PUB1YNL016W VTI1Q04338 217 aa4.3□□□□□ -1.72
PUB1YNL016W TAH18Q12181 623 aa4.3□□□□□ -1.72
PUB1YNL016W KCS1Q12494 1050 aa4.3□□□□□ -1.72
PUB1YNL016W NPP1P25353 742 aa4.29□□□□□ -1.72
PUB1YNL016W YCL049CP25577 312 aa4.29□□□□□ -1.72
PUB1YNL016W ELM1P32801 640 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms