RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	YIL001W	P40560	513 aa		4.36	□□□□□ -1.71
NUG1	YER006W	IRC24	P40580	263 aa		4.36	□□□□□ -1.71
NUG1	YER006W	STB1	P42845	420 aa		4.36	□□□□□ -1.71
NUG1	YER006W	SNZ3	P43545	298 aa		4.36	□□□□□ -1.71
NUG1	YER006W	HAM1	P47119	197 aa	Known RBP	4.36	□□□□□ -1.71
NUG1	YER006W	RBL2	P48606	106 aa	Known RBP	4.36	□□□□□ -1.71
NUG1	YER006W	UBA2	P52488	636 aa		4.36	□□□□□ -1.71
NUG1	YER006W	CAF130	P53280	1122 aa	Predicted RBP	4.36	□□□□□ -1.71
NUG1	YER006W	SNZ2	P53824	298 aa		4.36	□□□□□ -1.71
NUG1	YER006W	RRP17	Q04031	235 aa	Predicted RBP	4.36	□□□□□ -1.71
NUG1	YER006W	SYF1	Q04048	859 aa	Predicted RBP	4.36	□□□□□ -1.71
NUG1	YER006W	KAR5	Q04746	504 aa		4.36	□□□□□ -1.71
NUG1	YER006W	MCP2	Q06567	569 aa		4.36	□□□□□ -1.71
NUG1	YER006W	MCM21	Q06675	368 aa		4.36	□□□□□ -1.71
NUG1	YER006W	OPY2	Q06810	360 aa		4.36	□□□□□ -1.71
NUG1	YER006W	VHS3	Q08438	674 aa		4.36	□□□□□ -1.71
NUG1	YER006W	FOB1	O13329	566 aa		4.36	□□□□□ -1.71
NUG1	YER006W	RAD4	P14736	754 aa		4.36	□□□□□ -1.71
NUG1	YER006W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
NUG1	YER006W	SMC1	P32908	1225 aa		4.36	□□□□□ -1.71
NUG1	YER006W	YKL100C	P34248	587 aa		4.36	□□□□□ -1.71
NUG1	YER006W	FUI1	P38196	639 aa		4.36	□□□□□ -1.71
NUG1	YER006W	RIM11	P38615	370 aa		4.36	□□□□□ -1.71
NUG1	YER006W	APE4	P38821	490 aa		4.36	□□□□□ -1.71
NUG1	YER006W	RAD55	P38953	406 aa		4.36	□□□□□ -1.71
NUG1	YER006W	STN1	P38960	494 aa		4.36	□□□□□ -1.71
NUG1	YER006W	RCY1	P39531	840 aa		4.36	□□□□□ -1.71
NUG1	YER006W	VID27	P40157	782 aa		4.36	□□□□□ -1.71
NUG1	YER006W	YIL092W	P40497	633 aa		4.36	□□□□□ -1.71
NUG1	YER006W	YIL089W	P40500	205 aa		4.36	□□□□□ -1.71
NUG1	YER006W	SAP185	P40856	1058 aa		4.36	□□□□□ -1.71
NUG1	YER006W	SSN8	P47821	323 aa		4.36	□□□□□ -1.71
NUG1	YER006W	ECL1	P48235	211 aa		4.36	□□□□□ -1.71
NUG1	YER006W	TRF5	P48561	642 aa	Known RBP	4.36	□□□□□ -1.71
NUG1	YER006W	ZDS2	P54786	942 aa		4.36	□□□□□ -1.71
NUG1	YER006W	PTA1	Q01329	785 aa	Predicted RBP	4.36	□□□□□ -1.71
NUG1	YER006W	ATP16	Q12165	160 aa		4.36	□□□□□ -1.71
NUG1	YER006W	FUR4	P05316	633 aa	Known RBP	4.35	□□□□□ -1.71
NUG1	YER006W	SES1	P07284	462 aa	Known RBP	4.35	□□□□□ -1.71
NUG1	YER006W	VAS1	P07806	1104 aa	Known RBP	4.35	□□□□□ -1.71
NUG1	YER006W	PGS1	P25578	521 aa		4.35	□□□□□ -1.71
NUG1	YER006W	DAL80	P26343	269 aa		4.35	□□□□□ -1.71
NUG1	YER006W	VPH1	P32563	840 aa	Known RBP	4.35	□□□□□ -1.71
NUG1	YER006W	SLA2	P33338	968 aa		4.35	□□□□□ -1.71
NUG1	YER006W	YKR018C	P36114	725 aa		4.35	□□□□□ -1.71
NUG1	YER006W	IRS4	P36115	615 aa	Known RBP	4.35	□□□□□ -1.71
NUG1	YER006W	SET3	P36124	751 aa		4.35	□□□□□ -1.71
NUG1	YER006W	RGD1	P38339	666 aa		4.35	□□□□□ -1.71
NUG1	YER006W	MBP1	P39678	833 aa		4.35	□□□□□ -1.71
NUG1	YER006W	KAP123	P40069	1113 aa	Known RBP	4.35	□□□□□ -1.71
NUG1	YER006W	MNT3	P40549	630 aa		4.35	□□□□□ -1.71
NUG1	YER006W	INA22	P40576	216 aa		4.35	□□□□□ -1.71
NUG1	YER006W	VPS53	P47061	822 aa		4.35	□□□□□ -1.71
NUG1	YER006W	ACF4	P47129	309 aa		4.35	□□□□□ -1.71
NUG1	YER006W	RNR4	P49723	345 aa	Known RBP	4.35	□□□□□ -1.71
NUG1	YER006W	STB4	P50104	949 aa		4.35	□□□□□ -1.71
NUG1	YER006W	SEC5	P89102	971 aa		4.35	□□□□□ -1.71
NUG1	YER006W	YKR005C	Q02203	525 aa		4.35	□□□□□ -1.71
NUG1	YER006W	EGD1	Q02642	157 aa	Known RBP	4.35	□□□□□ -1.71
NUG1	YER006W	FIN1	Q03898	291 aa		4.35	□□□□□ -1.71
NUG1	YER006W	STE23	Q06010	1027 aa		4.35	□□□□□ -1.71
NUG1	YER006W	VPS36	Q06696	566 aa		4.35	□□□□□ -1.71
NUG1	YER006W	SUB2	Q07478	446 aa	Known RBP	4.35	□□□□□ -1.71
NUG1	YER006W	YPL191C	Q08930	360 aa		4.35	□□□□□ -1.71
NUG1	YER006W	ATG9	Q12142	997 aa		4.35	□□□□□ -1.71
NUG1	YER006W	GPR1	Q12361	961 aa		4.35	□□□□□ -1.71
NUG1	YER006W	RAV1	P47104	1357 aa		4.35	□□□□□ -1.71
NUG1	YER006W	AUS1	Q08409	1394 aa		4.35	□□□□□ -1.71
NUG1	YER006W	RIM15	P43565	1770 aa		4.34	□□□□□ -1.71
NUG1	YER006W	FAS2	P19097	1887 aa	Known RBP	4.34	□□□□□ -1.71
NUG1	YER006W	PWP1	P21304	576 aa	Known RBP	4.34	□□□□□ -1.71
NUG1	YER006W	RPB10	P22139	70 aa		4.34	□□□□□ -1.71
NUG1	YER006W	RAD27	P26793	382 aa		4.34	□□□□□ -1.71
NUG1	YER006W	HEM3	P28789	327 aa		4.34	□□□□□ -1.71
NUG1	YER006W	ITR1	P30605	584 aa		4.34	□□□□□ -1.71
NUG1	YER006W	PIH1	P38768	344 aa		4.34	□□□□□ -1.71
NUG1	YER006W	RRF1	P38771	230 aa		4.34	□□□□□ -1.71
NUG1	YER006W	FCY21	P40039	528 aa		4.34	□□□□□ -1.71
NUG1	YER006W	FMP10	P40098	244 aa		4.34	□□□□□ -1.71
NUG1	YER006W	PSY2	P40164	858 aa		4.34	□□□□□ -1.71
NUG1	YER006W	NEO1	P40527	1151 aa		4.34	□□□□□ -1.71
NUG1	YER006W	GVP36	P40531	326 aa	Known RBP	4.34	□□□□□ -1.71
NUG1	YER006W	ULP2	P40537	1034 aa	Predicted RBP	4.34	□□□□□ -1.71
NUG1	YER006W	VTC2	P43585	828 aa		4.34	□□□□□ -1.71
NUG1	YER006W	SPO74	P45819	413 aa		4.34	□□□□□ -1.71
NUG1	YER006W	VMA10	P48836	114 aa	Known RBP	4.34	□□□□□ -1.71
NUG1	YER006W	FMS1	P50264	508 aa		4.34	□□□□□ -1.71
NUG1	YER006W	ATP22	P50273	684 aa	Predicted RBP	4.34	□□□□□ -1.71
NUG1	YER006W	ALT1	P52893	592 aa		4.34	□□□□□ -1.71
NUG1	YER006W	NCE103	P53615	221 aa		4.34	□□□□□ -1.71
NUG1	YER006W	MEC3	Q02574	474 aa		4.34	□□□□□ -1.71
NUG1	YER006W	RBA50	Q04418	439 aa		4.34	□□□□□ -1.71
NUG1	YER006W	DON1	Q05610	365 aa		4.34	□□□□□ -1.71
NUG1	YER006W	BRE4	Q07660	1125 aa		4.34	□□□□□ -1.71
NUG1	YER006W	ELG1	Q12050	791 aa		4.34	□□□□□ -1.71
NUG1	YER006W	ACF2	Q12168	779 aa		4.34	□□□□□ -1.71
NUG1	YER006W	SCM3	Q12334	223 aa		4.34	□□□□□ -1.71
NUG1	YER006W	ADE6	P38972	1358 aa	Known RBP	4.33	□□□□□ -1.72
NUG1	YER006W	YPR089W	O13585	888 aa		4.33	□□□□□ -1.72
NUG1	YER006W	CYC7	P00045	113 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 40 ms