RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W HXT15P54854 567 aa1.53□□□□□ -2.17
MSN5YDR335W ATG33Q06485 197 aa1.53□□□□□ -2.17
MSN5YDR335W YPR172WQ06608 200 aa1.53□□□□□ -2.17
MSN5YDR335W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.53□□□□□ -2.17not detected
MSN5YDR335W CWC2Q12046 339 aaPredicted RBP1.53□□□□□ -2.17
MSN5YDR335W HAL9Q12180 1030 aa1.53□□□□□ -2.17
MSN5YDR335W RKM4Q12504 494 aa1.53□□□□□ -2.17
MSN5YDR335W PAR32Q12515 295 aaKnown RBP1.53□□□□□ -2.17
MSN5YDR335W YML133CQ03099 1374 aa1.52□□□□□ -2.17
MSN5YDR335W YLL067CQ07888 1374 aa1.52□□□□□ -2.17
MSN5YDR335W YLL066CQ99208 1374 aa1.52□□□□□ -2.17
MSN5YDR335W TRP3P00937 484 aa1.52□□□□□ -2.17
MSN5YDR335W RPS21AP0C0V8 87 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W AFG2P32794 780 aa1.52□□□□□ -2.17
MSN5YDR335W AIM26P32858 118 aa1.52□□□□□ -2.17
MSN5YDR335W DHR2P36009 735 aaPredicted RBP1.52□□□□□ -2.17
MSN5YDR335W NPR3P38742 1146 aa1.52□□□□□ -2.17
MSN5YDR335W SKN7P38889 622 aa1.52□□□□□ -2.17
MSN5YDR335W EAF5P39995 279 aa1.52□□□□□ -2.17
MSN5YDR335W KAP123P40069 1113 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W SCS2P40075 244 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W TOK1P40310 691 aa1.52□□□□□ -2.17
MSN5YDR335W ZIM17P42844 174 aa1.52□□□□□ -2.17
MSN5YDR335W CIR1P42940 261 aa1.52□□□□□ -2.17
MSN5YDR335W GZF3P42944 551 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W MAL11P53048 616 aa1.52□□□□□ -2.17
MSN5YDR335W PUS2P53167 370 aa1.52□□□□□ -2.17
MSN5YDR335W COX18P53239 316 aa1.52□□□□□ -2.17
MSN5YDR335W NCS2P53923 493 aaPredicted RBP1.52□□□□□ -2.17
MSN5YDR335W SFB2P53953 876 aa1.52□□□□□ -2.17
MSN5YDR335W FCP1Q03254 732 aa1.52□□□□□ -2.17
MSN5YDR335W YLR001CQ07895 862 aa1.52□□□□□ -2.17
MSN5YDR335W SKM1Q12469 655 aa1.52□□□□□ -2.17
MSN5YDR335W FRE6Q12473 712 aa1.52□□□□□ -2.17
MSN5YDR335W GCN2P15442 1659 aa1.52□□□□□ -2.17
MSN5YDR335W PRC1P00729 532 aa1.52□□□□□ -2.17
MSN5YDR335W PHO3P24031 467 aa1.52□□□□□ -2.17
MSN5YDR335W TEF4P36008 412 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W POL12P38121 705 aaPredicted RBP1.52□□□□□ -2.17
MSN5YDR335W ALG3P38179 458 aa1.52□□□□□ -2.17
MSN5YDR335W MCX1P38323 520 aaPredicted RBP1.52□□□□□ -2.17
MSN5YDR335W BCD1P38772 366 aa1.52□□□□□ -2.17
MSN5YDR335W DUN1P39009 513 aa1.52□□□□□ -2.17
MSN5YDR335W JEM1P40358 645 aa1.52□□□□□ -2.17
MSN5YDR335W GNP1P48813 663 aa1.52□□□□□ -2.17
MSN5YDR335W HOS2P53096 452 aaPredicted RBP1.52□□□□□ -2.17
MSN5YDR335W DUS1P53759 423 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W TPP1Q03796 238 aa1.52□□□□□ -2.17
MSN5YDR335W SMF3Q12078 473 aaPredicted RBP1.52□□□□□ -2.17
MSN5YDR335W COX17Q12287 69 aa1.52□□□□□ -2.17
MSN5YDR335W RPS21BQ3E754 87 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
MSN5YDR335W DGR2P32330 852 aa1.52□□□□□ -2.17
MSN5YDR335W RRP8P38961 392 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W DPH1P40487 425 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W GYP8P43570 497 aa1.52□□□□□ -2.17
MSN5YDR335W MAD3P47074 515 aa1.52□□□□□ -2.17
MSN5YDR335W MRPL13Q02204 264 aa1.52□□□□□ -2.17
MSN5YDR335W SKY1Q03656 742 aa1.52□□□□□ -2.17
MSN5YDR335W NHX1Q04121 633 aa1.52□□□□□ -2.17
MSN5YDR335W GAD1Q04792 585 aa1.52□□□□□ -2.17
MSN5YDR335W YDR338CQ05497 695 aa1.52□□□□□ -2.17
MSN5YDR335W SWA2Q06677 668 aa1.52□□□□□ -2.17
MSN5YDR335W IMH1Q06704 911 aaKnown RBP1.52□□□□□ -2.17
MSN5YDR335W RTP1Q12751 981 aa1.52□□□□□ -2.17
MSN5YDR335W HTS1P07263 546 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W GCD1P09032 578 aaPredicted RBP1.51□□□□□ -2.17
MSN5YDR335W CMK1P27466 446 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W KIP1P28742 1111 aa1.51□□□□□ -2.17
MSN5YDR335W HEM12P32347 362 aaPredicted RBP1.51□□□□□ -2.17
MSN5YDR335W HBS1P32769 611 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W MDL1P33310 695 aa1.51□□□□□ -2.17
MSN5YDR335W SDS22P36047 338 aa1.51□□□□□ -2.17
MSN5YDR335W DID4P36108 232 aa1.51□□□□□ -2.17
MSN5YDR335W MRPL36P36531 177 aa1.51□□□□□ -2.17
MSN5YDR335W POA1P38218 177 aa1.51□□□□□ -2.17
MSN5YDR335W FTH1P38310 465 aa1.51□□□□□ -2.17
MSN5YDR335W EMP65P40085 556 aa1.51□□□□□ -2.17
MSN5YDR335W PFK26P40433 827 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W ARF3P40994 183 aaRIP-Chip data1.51□□□□□ -2.17not detected
MSN5YDR335W SSU1P41930 458 aa1.51□□□□□ -2.17
MSN5YDR335W NIT2P47016 307 aa1.51□□□□□ -2.17
MSN5YDR335W PAP2P53632 584 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W DSE4P53753 1117 aa1.51□□□□□ -2.17
MSN5YDR335W YDL073WQ07454 984 aa1.51□□□□□ -2.17
MSN5YDR335W MDM12Q92328 271 aa1.51□□□□□ -2.17
MSN5YDR335W YOR111WQ99210 232 aa1.51□□□□□ -2.17
MSN5YDR335W YLR302CO13544 120 aa1.51□□□□□ -2.17
MSN5YDR335W DIF1O13577 133 aa1.51□□□□□ -2.17
MSN5YDR335W TPK1P06244 397 aa1.51□□□□□ -2.17
MSN5YDR335W PRO1P32264 428 aa1.51□□□□□ -2.17
MSN5YDR335W YER156CP40093 338 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W RAD26P40352 1085 aa1.51□□□□□ -2.17
MSN5YDR335W MNN11P46985 422 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W SET2P46995 733 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W AVT1P47082 602 aa1.51□□□□□ -2.17
MSN5YDR335W CNM67P53865 581 aaKnown RBP1.51□□□□□ -2.17
MSN5YDR335W SIW14P53965 281 aa1.51□□□□□ -2.17
MSN5YDR335W RCM1P53972 490 aa1.51□□□□□ -2.17
MSN5YDR335W TRS130Q03660 1102 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms