RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 DLK2Q6UY11 383 aa21.51■■□□□ 1.03
PHGDH-227ENST00000641811 LPIN2Q92539 896 aa21.51■■□□□ 1.03
PHGDH-227ENST00000641811 TFCP2Q12800 502 aa21.5■■□□□ 1.03
PHGDH-227ENST00000641811 SCARF1Q14162 830 aa21.5■■□□□ 1.03
PHGDH-227ENST00000641811 POLA2Q14181 598 aa21.5■■□□□ 1.03
PHGDH-227ENST00000641811 MVPQ14764 893 aaKnown RBP21.5■■□□□ 1.03
PHGDH-227ENST00000641811 USP48Q86UV5 1035 aa21.5■■□□□ 1.03
PHGDH-227ENST00000641811 OGFOD1Q8N543 542 aa21.5■■□□□ 1.03
PHGDH-227ENST00000641811 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.5■■□□□ 1.03
PHGDH-227ENST00000641811 FAM205AQ6ZU69 1335 aa21.5■■□□□ 1.03
PHGDH-227ENST00000641811 F8W031 263 aaPredicted RBP21.49■■□□□ 1.03
PHGDH-227ENST00000641811 CHAF1AQ13111 956 aaPredicted RBP21.49■■□□□ 1.03
PHGDH-227ENST00000641811 CREBZFQ9NS37 354 aa21.49■■□□□ 1.03
PHGDH-227ENST00000641811 GGA3Q9NZ52 723 aa21.49■■□□□ 1.03
PHGDH-227ENST00000641811 TMEM88BA6NKF7 163 aa21.48■■□□□ 1.03
PHGDH-227ENST00000641811 NBPF9Q3BBW0 867 aa21.48■■□□□ 1.03
PHGDH-227ENST00000641811 CDC37L1Q7L3B6 337 aa21.48■■□□□ 1.03
PHGDH-227ENST00000641811 SSH3Q8TE77 659 aa21.48■■□□□ 1.03
PHGDH-227ENST00000641811 FRAT2O75474 233 aaPredicted RBP21.47■■□□□ 1.03
PHGDH-227ENST00000641811 ADORA1P30542 326 aa21.47■■□□□ 1.03
PHGDH-227ENST00000641811 TIMM10P62072 90 aa21.47■■□□□ 1.03
PHGDH-227ENST00000641811 FKBP1AP62942 108 aaKnown RBP21.47■■□□□ 1.03
PHGDH-227ENST00000641811 MFSD14BQ5SR56 506 aa21.47■■□□□ 1.03
PHGDH-227ENST00000641811 ANGEL2Q5VTE6 544 aaKnown RBP21.47■■□□□ 1.03
PHGDH-227ENST00000641811 KRT26Q7Z3Y9 468 aa21.47■■□□□ 1.03
PHGDH-227ENST00000641811 DCPSQ96C86 337 aaKnown RBP21.47■■□□□ 1.03
PHGDH-227ENST00000641811 ADM5C9JUS6 153 aa21.46■■□□□ 1.03
PHGDH-227ENST00000641811 G3BP1Q13283 466 aaKnown RBP eCLIP21.46■■□□□ 1.031e-6■■■□□ 18.8
PHGDH-227ENST00000641811 CST9Q5W186 159 aa21.46■■□□□ 1.03
PHGDH-227ENST00000641811 CEP85Q6P2H3 762 aa21.46■■□□□ 1.03
PHGDH-227ENST00000641811 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-227ENST00000641811 HDAC9Q9UKV0 1011 aa21.46■■□□□ 1.03
PHGDH-227ENST00000641811 SCAF8Q9UPN6 1271 aaKnown RBP21.46■■□□□ 1.03
PHGDH-227ENST00000641811 PCDHAC2Q9Y5I4 1007 aa21.46■■□□□ 1.03
PHGDH-227ENST00000641811 WNT10BO00744 389 aa21.45■■□□□ 1.02
PHGDH-227ENST00000641811 GRIK5Q16478 980 aa21.45■■□□□ 1.02
PHGDH-227ENST00000641811 DDX19BQ9UMR2 479 aa21.45■■□□□ 1.02
PHGDH-227ENST00000641811 SURF6O75683 361 aaKnown RBP21.44■■□□□ 1.02
PHGDH-227ENST00000641811 PHKA1P46020 1223 aa21.44■■□□□ 1.02
PHGDH-227ENST00000641811 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
PHGDH-227ENST00000641811 KLRG1Q96E93 195 aa21.44■■□□□ 1.02
PHGDH-227ENST00000641811 ZNF408Q9H9D4 720 aa21.44■■□□□ 1.02
PHGDH-227ENST00000641811 ZBTB40Q9NUA8 1239 aa21.44■■□□□ 1.02
PHGDH-227ENST00000641811 POLR2AP24928 1970 aaKnown RBP21.44■■□□□ 1.02
PHGDH-227ENST00000641811 A0A1B0GUL7 405 aa21.43■■□□□ 1.02
PHGDH-227ENST00000641811 CELF2O95319 508 aaKnown RBP21.43■■□□□ 1.02
PHGDH-227ENST00000641811 ZBED3Q96IU2 234 aaPredicted RBP21.43■■□□□ 1.02
PHGDH-227ENST00000641811 MKRN1Q9UHC7 482 aaKnown RBP21.43■■□□□ 1.02
PHGDH-227ENST00000641811 AKAP2Q9Y2D5 859 aa21.43■■□□□ 1.02
PHGDH-227ENST00000641811 MMP14P50281 582 aa21.42■■□□□ 1.02
PHGDH-227ENST00000641811 OS9Q13438 667 aaPredicted RBP21.42■■□□□ 1.02
PHGDH-227ENST00000641811 DLGAP5Q15398 846 aa21.42■■□□□ 1.02
PHGDH-227ENST00000641811 SULF1Q8IWU6 871 aa21.42■■□□□ 1.02
PHGDH-227ENST00000641811 NEUROD6Q96NK8 337 aa21.42■■□□□ 1.02
PHGDH-227ENST00000641811 TTF2Q9UNY4 1162 aaKnown RBP21.42■■□□□ 1.02
PHGDH-227ENST00000641811 COL1A1P02452 1464 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-227ENST00000641811 CFAP100Q494V2 611 aa21.41■■□□□ 1.02
PHGDH-227ENST00000641811 CCDC102BQ68D86 513 aa21.41■■□□□ 1.02
PHGDH-227ENST00000641811 XAGE2Q96GT9 111 aa21.41■■□□□ 1.02
PHGDH-227ENST00000641811 ABT1Q9ULW3 272 aaKnown RBP21.41■■□□□ 1.02
PHGDH-227ENST00000641811 TRPM7Q96QT4 1865 aa21.41■■□□□ 1.02
PHGDH-227ENST00000641811 AOX1Q06278 1338 aa21.4■■□□□ 1.02
PHGDH-227ENST00000641811 TBC1D22AQ8WUA7 517 aa21.4■■□□□ 1.02
PHGDH-227ENST00000641811 NOP58Q9Y2X3 529 aaKnown RBP21.4■■□□□ 1.02
PHGDH-227ENST00000641811 ARAP2Q8WZ64 1704 aa21.4■■□□□ 1.02
PHGDH-227ENST00000641811 PITPNM2Q9BZ72 1349 aa21.39■■□□□ 1.01
PHGDH-227ENST00000641811 RBM5P52756 815 aaKnown RBP eCLIP21.39■■□□□ 1.01
PHGDH-227ENST00000641811 SIRT2Q8IXJ6 389 aa21.39■■□□□ 1.01
PHGDH-227ENST00000641811 MTMR14Q8NCE2 650 aa21.39■■□□□ 1.01
PHGDH-227ENST00000641811 PRMT6Q96LA8 375 aaPredicted RBP21.39■■□□□ 1.01
PHGDH-227ENST00000641811 GNL3LQ9NVN8 582 aaKnown RBP21.39■■□□□ 1.01
PHGDH-227ENST00000641811 CNTNAP1P78357 1384 aa21.38■■□□□ 1.01
PHGDH-227ENST00000641811 SPDYE2BA6NHP3 402 aa21.38■■□□□ 1.01
PHGDH-227ENST00000641811 SPDYE6P0CI01 402 aa21.38■■□□□ 1.01
PHGDH-227ENST00000641811 PRAMEF18Q5VWM3 479 aa21.38■■□□□ 1.01
PHGDH-227ENST00000641811 CDCA5Q96FF9 252 aa21.38■■□□□ 1.01
PHGDH-227ENST00000641811 EXOC6BQ9Y2D4 811 aa21.38■■□□□ 1.01
PHGDH-227ENST00000641811 RRP1P56182 461 aaKnown RBP21.37■■□□□ 1.01
PHGDH-227ENST00000641811 WDR66Q8TBY9 1149 aa21.37■■□□□ 1.01
PHGDH-227ENST00000641811 CLRN2A0PK11 232 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 CRKP46108 304 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 RASGRF1Q13972 1273 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 DEFB115Q30KQ5 88 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 TNNI3KQ59H18 835 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 GORABQ5T7V8 394 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 RPAP2Q8IXW5 612 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-227ENST00000641811 CHMP4BQ9H444 224 aaKnown RBP21.36■■□□□ 1.01
PHGDH-227ENST00000641811 SERPINA10Q9UK55 444 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 DENND2AQ9ULE3 1009 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 TLL2Q9Y6L7 1015 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 FPGT-TNNI3KV9GXZ4 949 aa21.36■■□□□ 1.01
PHGDH-227ENST00000641811 MYH13Q9UKX3 1938 aa21.35■■□□□ 1.01
PHGDH-227ENST00000641811 RASSF10A6NK89 507 aa21.35■■□□□ 1.01
PHGDH-227ENST00000641811 VEGFBP49765 207 aa21.35■■□□□ 1.01
PHGDH-227ENST00000641811 GPR108Q9NPR9 543 aa21.35■■□□□ 1.01
PHGDH-227ENST00000641811 SEMA3EO15041 775 aa21.34■■□□□ 1.01
PHGDH-227ENST00000641811 SAPCD2Q86UD0 394 aa21.34■■□□□ 1.01
PHGDH-227ENST00000641811 JMYQ8N9B5 988 aa21.34■■□□□ 1.01
PHGDH-227ENST00000641811 DBNDD2Q9BQY9 259 aa21.34■■□□□ 1.01
PHGDH-227ENST00000641811 PRDX5P30044 214 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 470.8 ms