RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CNNM1Q9NRU3 951 aa21.17■□□□□ 0.98
PHGDH-213ENST00000641272 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.17■□□□□ 0.98
PHGDH-213ENST00000641272 SSC5DA1L4H1 1573 aa21.16■□□□□ 0.98
PHGDH-213ENST00000641272 LDHAL6AQ6ZMR3 332 aa21.15■□□□□ 0.98
PHGDH-213ENST00000641272 ZBED3Q96IU2 234 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-213ENST00000641272 COL1A1P02452 1464 aaPredicted RBP21.14■□□□□ 0.98
PHGDH-213ENST00000641272 AOX1Q06278 1338 aa21.14■□□□□ 0.97
PHGDH-213ENST00000641272 ZNF521Q96K83 1311 aa21.14■□□□□ 0.97
PHGDH-213ENST00000641272 CLRN2A0PK11 232 aa21.14■□□□□ 0.97
PHGDH-213ENST00000641272 ALDH1L1O75891 902 aa21.14■□□□□ 0.97
PHGDH-213ENST00000641272 DLGAP5Q15398 846 aa21.14■□□□□ 0.97
PHGDH-213ENST00000641272 C15orf52Q6ZUT6 534 aaKnown RBP21.14■□□□□ 0.97
PHGDH-213ENST00000641272 CFAP100Q494V2 611 aa21.13■□□□□ 0.97
PHGDH-213ENST00000641272 PUS3Q9BZE2 481 aaKnown RBP21.13■□□□□ 0.97
PHGDH-213ENST00000641272 OTOFQ9HC10 1997 aa21.12■□□□□ 0.97
PHGDH-213ENST00000641272 IL1R1P14778 569 aa21.12■□□□□ 0.97
PHGDH-213ENST00000641272 PTPN12Q05209 780 aaKnown RBP21.12■□□□□ 0.97
PHGDH-213ENST00000641272 KAZALD1Q96I82 304 aa21.12■□□□□ 0.97
PHGDH-213ENST00000641272 ANGEL1Q9UNK9 670 aaKnown RBP21.12■□□□□ 0.97
PHGDH-213ENST00000641272 TBC1D8O95759 1140 aa21.11■□□□□ 0.97
PHGDH-213ENST00000641272 NBPF7P0C2Y1 421 aaPredicted RBP21.11■□□□□ 0.97
PHGDH-213ENST00000641272 GYG1P46976 350 aa21.11■□□□□ 0.97
PHGDH-213ENST00000641272 VEZTQ9HBM0 779 aa21.11■□□□□ 0.97
PHGDH-213ENST00000641272 RBM5P52756 815 aaKnown RBP eCLIP21.1■□□□□ 0.97
PHGDH-213ENST00000641272 MLLT1Q03111 559 aaPredicted RBP21.1■□□□□ 0.97
PHGDH-213ENST00000641272 ARMC9Q7Z3E5 817 aa21.1■□□□□ 0.97
PHGDH-213ENST00000641272 DEFB129Q9H1M3 183 aa21.1■□□□□ 0.97
PHGDH-213ENST00000641272 BICC1Q9H694 974 aaKnown RBP21.1■□□□□ 0.97
PHGDH-213ENST00000641272 SPDYE2BA6NHP3 402 aa21.09■□□□□ 0.97
PHGDH-213ENST00000641272 SPDYE6P0CI01 402 aa21.09■□□□□ 0.97
PHGDH-213ENST00000641272 MMP14P50281 582 aa21.09■□□□□ 0.97
PHGDH-213ENST00000641272 MRPL50Q8N5N7 158 aaKnown RBP21.09■□□□□ 0.97
PHGDH-213ENST00000641272 SOX10P56693 466 aa21.08■□□□□ 0.97
PHGDH-213ENST00000641272 REM2Q8IYK8 340 aaPredicted RBP21.08■□□□□ 0.97
PHGDH-213ENST00000641272 IQSEC3Q9UPP2 1182 aaPredicted RBP21.08■□□□□ 0.97
PHGDH-213ENST00000641272 MFSD14BQ5SR56 506 aa21.07■□□□□ 0.96
PHGDH-213ENST00000641272 CTU1Q7Z7A3 348 aaKnown RBP21.07■□□□□ 0.96
PHGDH-213ENST00000641272 MTMR14Q8NCE2 650 aa21.07■□□□□ 0.96
PHGDH-213ENST00000641272 CLMNQ96JQ2 1002 aa21.07■□□□□ 0.96
PHGDH-213ENST00000641272 PRMT6Q96LA8 375 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-213ENST00000641272 MYH13Q9UKX3 1938 aa21.06■□□□□ 0.96
PHGDH-213ENST00000641272 LAMB1P07942 1786 aa21.06■□□□□ 0.96
PHGDH-213ENST00000641272 MYO1BO43795 1136 aa21.06■□□□□ 0.96
PHGDH-213ENST00000641272 ANKRD44Q8N8A2 993 aa21.06■□□□□ 0.96
PHGDH-213ENST00000641272 ZNF296Q8WUU4 475 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-213ENST00000641272 UTYO14607 1347 aa21.05■□□□□ 0.96
PHGDH-213ENST00000641272 FKBP1AP62942 108 aaKnown RBP21.05■□□□□ 0.96
PHGDH-213ENST00000641272 CHAF1AQ13111 956 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-213ENST00000641272 UBE4AQ14139 1066 aa21.05■□□□□ 0.96
PHGDH-213ENST00000641272 LRRC24Q50LG9 513 aa21.05■□□□□ 0.96
PHGDH-213ENST00000641272 LDLRAD1Q5T700 205 aa21.05■□□□□ 0.96
PHGDH-213ENST00000641272 KLHDC4Q8TBB5 520 aa21.05■□□□□ 0.96
PHGDH-213ENST00000641272 SSH1Q8WYL5 1049 aa21.05■□□□□ 0.96
PHGDH-213ENST00000641272 TTF2Q9UNY4 1162 aaKnown RBP21.05■□□□□ 0.96
PHGDH-213ENST00000641272 FAM205AQ6ZU69 1335 aa21.04■□□□□ 0.96
PHGDH-213ENST00000641272 HIBADHP31937 336 aaKnown RBP21.04■□□□□ 0.96
PHGDH-213ENST00000641272 RGS19P49795 217 aa21.04■□□□□ 0.96
PHGDH-213ENST00000641272 SREBF2Q12772 1141 aa21.04■□□□□ 0.96
PHGDH-213ENST00000641272 METTL24Q5JXM2 366 aa21.04■□□□□ 0.96
PHGDH-213ENST00000641272 NBPF12Q5TAG4 269 aaPredicted RBP21.04■□□□□ 0.96
PHGDH-213ENST00000641272 SPRYD7Q5W111 196 aa21.04■□□□□ 0.96
PHGDH-213ENST00000641272 TDRD7Q8NHU6 1098 aaKnown RBP21.04■□□□□ 0.96
PHGDH-213ENST00000641272 FAM84BQ96KN1 310 aaPredicted RBP21.04■□□□□ 0.96
PHGDH-213ENST00000641272 PPP2R3BQ9Y5P8 575 aa21.04■□□□□ 0.96
PHGDH-213ENST00000641272 GRIK5Q16478 980 aa21.03■□□□□ 0.96
PHGDH-213ENST00000641272 RABL6Q3YEC7 729 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-213ENST00000641272 CDAN1Q8IWY9 1227 aa21.03■□□□□ 0.96
PHGDH-213ENST00000641272 R3HDMLQ9H3Y0 253 aa21.03■□□□□ 0.96
PHGDH-213ENST00000641272 RIPOR2Q9Y4F9 1068 aa21.03■□□□□ 0.96
PHGDH-213ENST00000641272 PTPRCP08575 1304 aa21.03■□□□□ 0.96
PHGDH-213ENST00000641272 MROH5Q6ZUA9 1318 aa21.03■□□□□ 0.96
PHGDH-213ENST00000641272 E9PSI1 815 aa21.02■□□□□ 0.96
PHGDH-213ENST00000641272 TM4SF4P48230 202 aa21.02■□□□□ 0.96
PHGDH-213ENST00000641272 RASA3Q14644 834 aa21.02■□□□□ 0.96
PHGDH-213ENST00000641272 TDRD3Q9H7E2 651 aaKnown RBP21.02■□□□□ 0.96
PHGDH-213ENST00000641272 GPR25O00155 361 aa21.01■□□□□ 0.95
PHGDH-213ENST00000641272 VPS37DQ86XT2 251 aa21.01■□□□□ 0.95
PHGDH-213ENST00000641272 SLC10A4Q96EP9 437 aa21.01■□□□□ 0.95
PHGDH-213ENST00000641272 WNK4Q96J92 1243 aa21.01■□□□□ 0.95
PHGDH-213ENST00000641272 ZNF70Q9UC06 446 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-213ENST00000641272 PPP1R12BO60237 982 aaPredicted RBP21■□□□□ 0.95
PHGDH-213ENST00000641272 MAP3K11Q16584 847 aa21■□□□□ 0.95
PHGDH-213ENST00000641272 SPDYE2Q495Y8 402 aa21■□□□□ 0.95
PHGDH-213ENST00000641272 CDCA7LQ96GN5 454 aa21■□□□□ 0.95
PHGDH-213ENST00000641272 HPS5Q9UPZ3 1129 aa21■□□□□ 0.95
PHGDH-213ENST00000641272 TCP10L2B9ZVM9 353 aa20.99■□□□□ 0.95
PHGDH-213ENST00000641272 FRAT2O75474 233 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-213ENST00000641272 SLFN5Q08AF3 891 aa20.99■□□□□ 0.95
PHGDH-213ENST00000641272 SUPT20HL1Q3ZLR7 823 aa20.99■□□□□ 0.95
PHGDH-213ENST00000641272 VGLL2Q8N8G2 317 aa20.99■□□□□ 0.95
PHGDH-213ENST00000641272 SMC4Q9NTJ3 1288 aa20.99■□□□□ 0.95
PHGDH-213ENST00000641272 GJA5P36382 358 aa20.98■□□□□ 0.95
PHGDH-213ENST00000641272 CRKP46108 304 aa20.98■□□□□ 0.95
PHGDH-213ENST00000641272 DZIP1LQ8IYY4 767 aaKnown RBP20.98■□□□□ 0.95
PHGDH-213ENST00000641272 SERPINA10Q9UK55 444 aa20.98■□□□□ 0.95
PHGDH-213ENST00000641272 MANSC4A6NHS7 340 aaPredicted RBP20.97■□□□□ 0.95
PHGDH-213ENST00000641272 IGF2BP3O00425 579 aaKnown RBP eCLIP20.97■□□□□ 0.95
PHGDH-213ENST00000641272 IREB2P48200 963 aaKnown RBP20.97■□□□□ 0.95
PHGDH-213ENST00000641272 CACNB3P54284 484 aa20.97■□□□□ 0.95
PHGDH-213ENST00000641272 TNFAIP1Q13829 316 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms