RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ANKRD45Q5TZF3 282 aa16.21■□□□□ 0.19
GTF3A-209ENST00000640289 RSBN1LQ6PCB5 846 aaPredicted RBP16.21■□□□□ 0.19
GTF3A-209ENST00000640289 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
GTF3A-209ENST00000640289 CERS5Q8N5B7 392 aa16.21■□□□□ 0.19
GTF3A-209ENST00000640289 L3MBTL3Q96JM7 780 aaPredicted RBP16.21■□□□□ 0.19
GTF3A-209ENST00000640289 RRAGCQ9HB90 399 aa16.21■□□□□ 0.19
GTF3A-209ENST00000640289 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
GTF3A-209ENST00000640289 FAM205AQ6ZU69 1335 aa16.2■□□□□ 0.18
GTF3A-209ENST00000640289 ARID4AP29374 1257 aaPredicted RBP16.2■□□□□ 0.18
GTF3A-209ENST00000640289 RASGRF1Q13972 1273 aa16.2■□□□□ 0.18
GTF3A-209ENST00000640289 SCARF1Q14162 830 aa16.2■□□□□ 0.18
GTF3A-209ENST00000640289 CCDC158Q5M9N0 1113 aa16.2■□□□□ 0.18
GTF3A-209ENST00000640289 TTC39AQ5SRH9 613 aa16.2■□□□□ 0.18
GTF3A-209ENST00000640289 B4GALNT3Q6L9W6 998 aa16.2■□□□□ 0.18
GTF3A-209ENST00000640289 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
GTF3A-209ENST00000640289 GPBP1L1Q9HC44 474 aaPredicted RBP16.2■□□□□ 0.18
GTF3A-209ENST00000640289 EPS15P42566 896 aa16.19■□□□□ 0.18
GTF3A-209ENST00000640289 MCAMP43121 646 aa16.19■□□□□ 0.18
GTF3A-209ENST00000640289 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
GTF3A-209ENST00000640289 GMLQ99445 158 aa16.19■□□□□ 0.18
GTF3A-209ENST00000640289 DENND2AQ9ULE3 1009 aa16.19■□□□□ 0.18
GTF3A-209ENST00000640289 RPS12P25398 132 aaKnown RBP16.18■□□□□ 0.18
GTF3A-209ENST00000640289 GRIK5Q16478 980 aa16.18■□□□□ 0.18
GTF3A-209ENST00000640289 MFSD14BQ5SR56 506 aa16.18■□□□□ 0.18
GTF3A-209ENST00000640289 MICALL2Q8IY33 904 aa16.18■□□□□ 0.18
GTF3A-209ENST00000640289 AGBL3Q8NEM8 1001 aa16.18■□□□□ 0.18
GTF3A-209ENST00000640289 OTUD7AQ8TE49 926 aaPredicted RBP16.18■□□□□ 0.18
GTF3A-209ENST00000640289 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
GTF3A-209ENST00000640289 HMG20BQ9P0W2 317 aa16.18■□□□□ 0.18
GTF3A-209ENST00000640289 WDR90Q96KV7 1748 aa16.18■□□□□ 0.18
GTF3A-209ENST00000640289 ZNF646O15015 1829 aaPredicted RBP16.17■□□□□ 0.18
GTF3A-209ENST00000640289 F8W031 263 aaPredicted RBP16.17■□□□□ 0.18
GTF3A-209ENST00000640289 SEMA3EO15041 775 aa16.17■□□□□ 0.18
GTF3A-209ENST00000640289 UQCRFS1P1P0C7P4 283 aa16.17■□□□□ 0.18
GTF3A-209ENST00000640289 LMOD1P29536 600 aaPredicted RBP16.17■□□□□ 0.18
GTF3A-209ENST00000640289 KIAA0825Q8IV33 1275 aa16.17■□□□□ 0.18
GTF3A-209ENST00000640289 DPF2Q92785 391 aa16.17■□□□□ 0.18
GTF3A-209ENST00000640289 SNRKQ9NRH2 765 aa16.17■□□□□ 0.18
GTF3A-209ENST00000640289 CNOT7Q9UIV1 285 aaKnown RBP16.17■□□□□ 0.18
GTF3A-209ENST00000640289 HACL1Q9UJ83 578 aa16.17■□□□□ 0.18
GTF3A-209ENST00000640289 NDUFB9Q9Y6M9 179 aa16.17■□□□□ 0.18
GTF3A-209ENST00000640289 MYO3BQ8WXR4 1341 aa16.17■□□□□ 0.18
GTF3A-209ENST00000640289 ZBTB22O15209 634 aa16.16■□□□□ 0.18
GTF3A-209ENST00000640289 FKBP1AP62942 108 aaKnown RBP16.16■□□□□ 0.18
GTF3A-209ENST00000640289 SPATA5Q8NB90 893 aa16.16■□□□□ 0.18
GTF3A-209ENST00000640289 ZNF512BQ96KM6 892 aaPredicted RBP16.16■□□□□ 0.18
GTF3A-209ENST00000640289 LNPKQ9C0E8 428 aa16.16■□□□□ 0.18
GTF3A-209ENST00000640289 ZBTB47Q9UFB7 747 aaPredicted RBP16.16■□□□□ 0.18
GTF3A-209ENST00000640289 PSME4Q14997 1843 aa16.15■□□□□ 0.18
GTF3A-209ENST00000640289 IQCA1LA6NCM1 817 aa16.15■□□□□ 0.18
GTF3A-209ENST00000640289 EGFRP00533 1210 aa16.15■□□□□ 0.18
GTF3A-209ENST00000640289 USP17L8P0C7I0 530 aa16.15■□□□□ 0.18
GTF3A-209ENST00000640289 VEGFAP15692 232 aaPredicted RBP16.15■□□□□ 0.18
GTF3A-209ENST00000640289 ZAP70P43403 619 aa16.15■□□□□ 0.18
GTF3A-209ENST00000640289 NUCB1Q02818 461 aa16.15■□□□□ 0.18
GTF3A-209ENST00000640289 TSHZ3Q63HK5 1081 aa16.15■□□□□ 0.18
GTF3A-209ENST00000640289 WDR66Q8TBY9 1149 aa16.15■□□□□ 0.18
GTF3A-209ENST00000640289 TBC1D22AQ8WUA7 517 aa16.15■□□□□ 0.18
GTF3A-209ENST00000640289 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
GTF3A-209ENST00000640289 KIF3CO14782 793 aa16.14■□□□□ 0.17
GTF3A-209ENST00000640289 PRDX5P30044 214 aa16.14■□□□□ 0.17
GTF3A-209ENST00000640289 EPHX2P34913 555 aa16.14■□□□□ 0.17
GTF3A-209ENST00000640289 RBM26Q5T8P6 1007 aaKnown RBP16.14■□□□□ 0.17
GTF3A-209ENST00000640289 TBC1D9Q6ZT07 1266 aa16.14■□□□□ 0.17
GTF3A-209ENST00000640289 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
GTF3A-209ENST00000640289 CHD1LQ86WJ1 897 aa16.14■□□□□ 0.17
GTF3A-209ENST00000640289 TRPM4Q8TD43 1214 aa16.14■□□□□ 0.17
GTF3A-209ENST00000640289 PDS5AQ29RF7 1337 aaKnown RBP16.14■□□□□ 0.17
GTF3A-209ENST00000640289 H7C1D1 291 aa16.13■□□□□ 0.17
GTF3A-209ENST00000640289 CYP2E1P05181 493 aaPredicted RBP16.13■□□□□ 0.17
GTF3A-209ENST00000640289 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
GTF3A-209ENST00000640289 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
GTF3A-209ENST00000640289 ZNF280AP59817 542 aaPredicted RBP16.13■□□□□ 0.17
GTF3A-209ENST00000640289 TBC1D10BQ4KMP7 808 aaPredicted RBP16.13■□□□□ 0.17
GTF3A-209ENST00000640289 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
GTF3A-209ENST00000640289 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
GTF3A-209ENST00000640289 ADARB2Q9NS39 739 aaKnown RBP16.13■□□□□ 0.17
GTF3A-209ENST00000640289 ECHDC1Q9NTX5 307 aa16.13■□□□□ 0.17
GTF3A-209ENST00000640289 ABCF2Q9UG63 623 aa16.13■□□□□ 0.17
GTF3A-209ENST00000640289 TTF2Q9UNY4 1162 aaKnown RBP16.13■□□□□ 0.17
GTF3A-209ENST00000640289 SALL3Q9BXA9 1300 aa16.13■□□□□ 0.17
GTF3A-209ENST00000640289 SALL1Q9NSC2 1324 aa16.13■□□□□ 0.17
GTF3A-209ENST00000640289 ATP5JP18859 108 aa16.12■□□□□ 0.17
GTF3A-209ENST00000640289 HIRAP54198 1017 aaPredicted RBP16.12■□□□□ 0.17
GTF3A-209ENST00000640289 EAPPQ56P03 285 aaPredicted RBP16.12■□□□□ 0.17
GTF3A-209ENST00000640289 DNAJC2Q99543 621 aaKnown RBP16.12■□□□□ 0.17
GTF3A-209ENST00000640289 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
GTF3A-209ENST00000640289 MYOZ2Q9NPC6 264 aa16.12■□□□□ 0.17
GTF3A-209ENST00000640289 PCDHAC2Q9Y5I4 1007 aa16.12■□□□□ 0.17
GTF3A-209ENST00000640289 LDHBP07195 334 aaKnown RBP16.11■□□□□ 0.17
GTF3A-209ENST00000640289 MX1P20591 662 aa16.11■□□□□ 0.17
GTF3A-209ENST00000640289 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
GTF3A-209ENST00000640289 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
GTF3A-209ENST00000640289 OGFOD1Q8N543 542 aa16.11■□□□□ 0.17
GTF3A-209ENST00000640289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.11■□□□□ 0.17
GTF3A-209ENST00000640289 EDC3Q96F86 508 aaKnown RBP16.11■□□□□ 0.17
GTF3A-209ENST00000640289 PIH1D3Q9NQM4 214 aaKnown RBP16.11■□□□□ 0.17
GTF3A-209ENST00000640289 HDAC9Q9UKV0 1011 aa16.11■□□□□ 0.17
GTF3A-209ENST00000640289 USP50Q70EL3 339 aaPredicted RBP16.1■□□□□ 0.17
GTF3A-209ENST00000640289 CENPQQ7L2Z9 268 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms