RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 IQSEC3Q9UPP2 1182 aaPredicted RBP20.63■□□□□ 0.89
COLCA2-206ENST00000638573 GRIK5Q16478 980 aa20.62■□□□□ 0.89
COLCA2-206ENST00000638573 ZNF804AQ7Z570 1209 aa20.62■□□□□ 0.89
COLCA2-206ENST00000638573 OGFOD1Q8N543 542 aa20.62■□□□□ 0.89
COLCA2-206ENST00000638573 C2orf69Q8N8R5 385 aa20.62■□□□□ 0.89
COLCA2-206ENST00000638573 ZBED3Q96IU2 234 aaPredicted RBP20.62■□□□□ 0.89
COLCA2-206ENST00000638573 HHIPL1Q96JK4 782 aa20.62■□□□□ 0.89
COLCA2-206ENST00000638573 MYO3BQ8WXR4 1341 aa20.61■□□□□ 0.89
COLCA2-206ENST00000638573 BRPF1P55201 1214 aaPredicted RBP20.61■□□□□ 0.89
COLCA2-206ENST00000638573 RGMBQ6NW40 437 aa20.61■□□□□ 0.89
COLCA2-206ENST00000638573 FAM84BQ96KN1 310 aaPredicted RBP20.61■□□□□ 0.89
COLCA2-206ENST00000638573 PRDM10Q9NQV6 1147 aa20.61■□□□□ 0.89
COLCA2-206ENST00000638573 RFX5P48382 616 aaPredicted RBP20.6■□□□□ 0.89
COLCA2-206ENST00000638573 VGLL2Q8N8G2 317 aa20.6■□□□□ 0.89
COLCA2-206ENST00000638573 PITPNM2Q9BZ72 1349 aa20.59■□□□□ 0.89
COLCA2-206ENST00000638573 CLRN2A0PK11 232 aa20.59■□□□□ 0.89
COLCA2-206ENST00000638573 UBE2Q2LH0YL09 131 aa20.59■□□□□ 0.89
COLCA2-206ENST00000638573 IPO8O15397 1037 aaKnown RBP20.59■□□□□ 0.89
COLCA2-206ENST00000638573 MAP2K2P36507 400 aa20.59■□□□□ 0.89
COLCA2-206ENST00000638573 ZNF157P51786 506 aaPredicted RBP20.59■□□□□ 0.89
COLCA2-206ENST00000638573 PRKG1Q13976 671 aa20.59■□□□□ 0.89
COLCA2-206ENST00000638573 METTL24Q5JXM2 366 aa20.59■□□□□ 0.89
COLCA2-206ENST00000638573 API5Q9BZZ5 524 aaKnown RBP20.59■□□□□ 0.89
COLCA2-206ENST00000638573 KIF23Q02241 960 aaPredicted RBP20.58■□□□□ 0.89
COLCA2-206ENST00000638573 UBE4AQ14139 1066 aa20.58■□□□□ 0.89
COLCA2-206ENST00000638573 TDRD7Q8NHU6 1098 aaKnown RBP20.58■□□□□ 0.89
COLCA2-206ENST00000638573 MEIS3Q99687 375 aa20.58■□□□□ 0.89
COLCA2-206ENST00000638573 HIBADHP31937 336 aaKnown RBP20.57■□□□□ 0.88
COLCA2-206ENST00000638573 CFAP100Q494V2 611 aa20.57■□□□□ 0.88
COLCA2-206ENST00000638573 RASAL3Q86YV0 1011 aa20.57■□□□□ 0.88
COLCA2-206ENST00000638573 FRAT1Q92837 279 aaPredicted RBP20.57■□□□□ 0.88
COLCA2-206ENST00000638573 BCAR3O75815 825 aa20.56■□□□□ 0.88
COLCA2-206ENST00000638573 SLC10A3P09131 477 aa20.56■□□□□ 0.88
COLCA2-206ENST00000638573 CHAF1AQ13111 956 aaPredicted RBP20.56■□□□□ 0.88
COLCA2-206ENST00000638573 NOGQ13253 232 aa20.56■□□□□ 0.88
COLCA2-206ENST00000638573 DLGAP5Q15398 846 aa20.56■□□□□ 0.88
COLCA2-206ENST00000638573 ARHGAP45Q92619 1136 aa20.56■□□□□ 0.88
COLCA2-206ENST00000638573 PRMT6Q96LA8 375 aaPredicted RBP20.56■□□□□ 0.88
COLCA2-206ENST00000638573 SIL1Q9H173 461 aa20.56■□□□□ 0.88
COLCA2-206ENST00000638573 HDAC9Q9UKV0 1011 aa20.56■□□□□ 0.88
COLCA2-206ENST00000638573 MROH5Q6ZUA9 1318 aa20.55■□□□□ 0.88
COLCA2-206ENST00000638573 BCAMP50895 628 aa20.55■□□□□ 0.88
COLCA2-206ENST00000638573 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
COLCA2-206ENST00000638573 BEGAINQ9BUH8 593 aa20.55■□□□□ 0.88
COLCA2-206ENST00000638573 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
COLCA2-206ENST00000638573 PA2G4Q9UQ80 394 aaKnown RBP20.55■□□□□ 0.88
COLCA2-206ENST00000638573 LRRFIP2Q9Y608 721 aaKnown RBP20.55■□□□□ 0.88
COLCA2-206ENST00000638573 FAM205AQ6ZU69 1335 aa20.54■□□□□ 0.88
COLCA2-206ENST00000638573 UBTFL1P0CB47 393 aaPredicted RBP20.54■□□□□ 0.88
COLCA2-206ENST00000638573 MKRN3Q13064 507 aaKnown RBP20.54■□□□□ 0.88
COLCA2-206ENST00000638573 MFSD14BQ5SR56 506 aa20.54■□□□□ 0.88
COLCA2-206ENST00000638573 ATG9AQ7Z3C6 839 aa20.54■□□□□ 0.88
COLCA2-206ENST00000638573 FBXO33Q7Z6M2 555 aa20.54■□□□□ 0.88
COLCA2-206ENST00000638573 SSC5DA1L4H1 1573 aa20.54■□□□□ 0.88
COLCA2-206ENST00000638573 SPDYE2BA6NHP3 402 aa20.53■□□□□ 0.88
COLCA2-206ENST00000638573 PDE8BO95263 885 aa20.53■□□□□ 0.88
COLCA2-206ENST00000638573 SPDYE6P0CI01 402 aa20.53■□□□□ 0.88
COLCA2-206ENST00000638573 TTLL12Q14166 644 aaPredicted RBP20.53■□□□□ 0.88
COLCA2-206ENST00000638573 ZKSCAN2Q63HK3 967 aa20.53■□□□□ 0.88
COLCA2-206ENST00000638573 CDAN1Q8IWY9 1227 aa20.53■□□□□ 0.88
COLCA2-206ENST00000638573 PAPPA2Q9BXP8 1791 aa20.52■□□□□ 0.88
COLCA2-206ENST00000638573 EYA2O00167 538 aa20.52■□□□□ 0.88
COLCA2-206ENST00000638573 FGFR2P21802 821 aa20.52■□□□□ 0.88
COLCA2-206ENST00000638573 RBM5P52756 815 aaKnown RBP eCLIP20.52■□□□□ 0.88
COLCA2-206ENST00000638573 ATF7IPQ6VMQ6 1270 aa20.52■□□□□ 0.88
COLCA2-206ENST00000638573 CSRNP1Q96S65 589 aa20.52■□□□□ 0.88
COLCA2-206ENST00000638573 VEZTQ9HBM0 779 aa20.52■□□□□ 0.88
COLCA2-206ENST00000638573 FKBP1AP62942 108 aaKnown RBP20.51■□□□□ 0.87
COLCA2-206ENST00000638573 APOBEC3FQ8IUX4 373 aaKnown RBP20.51■□□□□ 0.87
COLCA2-206ENST00000638573 CLUAP1Q96AJ1 413 aa20.51■□□□□ 0.87
COLCA2-206ENST00000638573 DEFB129Q9H1M3 183 aa20.51■□□□□ 0.87
COLCA2-206ENST00000638573 RCAN3Q9UKA8 241 aa20.51■□□□□ 0.87
COLCA2-206ENST00000638573 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
COLCA2-206ENST00000638573 COL1A1P02452 1464 aaPredicted RBP20.5■□□□□ 0.87
COLCA2-206ENST00000638573 TRIM27P14373 513 aa20.5■□□□□ 0.87
COLCA2-206ENST00000638573 MTMR14Q8NCE2 650 aa20.5■□□□□ 0.87
COLCA2-206ENST00000638573 CCDC102AQ96A19 550 aa20.5■□□□□ 0.87
COLCA2-206ENST00000638573 TDRD3Q9H7E2 651 aaKnown RBP20.5■□□□□ 0.87
COLCA2-206ENST00000638573 TRPA1O75762 1119 aa20.49■□□□□ 0.87
COLCA2-206ENST00000638573 VPS37DQ86XT2 251 aa20.49■□□□□ 0.87
COLCA2-206ENST00000638573 FTSJ3Q8IY81 847 aaKnown RBP20.49■□□□□ 0.87
COLCA2-206ENST00000638573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.49■□□□□ 0.87
COLCA2-206ENST00000638573 FKBP1BP68106 108 aa20.48■□□□□ 0.87
COLCA2-206ENST00000638573 PUM3Q15397 648 aaKnown RBP20.48■□□□□ 0.87
COLCA2-206ENST00000638573 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
COLCA2-206ENST00000638573 CLMNQ96JQ2 1002 aa20.48■□□□□ 0.87
COLCA2-206ENST00000638573 RNF186Q9NXI6 227 aa20.48■□□□□ 0.87
COLCA2-206ENST00000638573 ANGEL1Q9UNK9 670 aaKnown RBP20.48■□□□□ 0.87
COLCA2-206ENST00000638573 CRKP46108 304 aa20.47■□□□□ 0.87
COLCA2-206ENST00000638573 CACNB3P54284 484 aa20.47■□□□□ 0.87
COLCA2-206ENST00000638573 INTS3Q68E01 1043 aaKnown RBP20.47■□□□□ 0.87
COLCA2-206ENST00000638573 ZNF70Q9UC06 446 aaPredicted RBP20.47■□□□□ 0.87
COLCA2-206ENST00000638573 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
COLCA2-206ENST00000638573 ADORA1P30542 326 aa20.46■□□□□ 0.87
COLCA2-206ENST00000638573 RASA3Q14644 834 aa20.46■□□□□ 0.87
COLCA2-206ENST00000638573 CAVIN4Q5BKX8 364 aa20.46■□□□□ 0.87
COLCA2-206ENST00000638573 DZIP1LQ8IYY4 767 aaKnown RBP20.46■□□□□ 0.87
COLCA2-206ENST00000638573 TCP10L2B9ZVM9 353 aa20.45■□□□□ 0.86
COLCA2-206ENST00000638573 IFIT1P09914 478 aaKnown RBP20.45■□□□□ 0.86
COLCA2-206ENST00000638573 NF2P35240 595 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms