RNA–Protein interactions for RNA: ENST00000638506.1

KCNMA1-236, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-236ENST00000638506 ZNF34Q8IZ26 560 aa16.09■□□□□ 0.17
KCNMA1-236ENST00000638506 FBXO41Q8TF61 875 aa16.09■□□□□ 0.17
KCNMA1-236ENST00000638506 SCRN1Q12765 414 aa16.09■□□□□ 0.17
KCNMA1-236ENST00000638506 LLPHQ9BRT6 129 aaKnown RBP16.09■□□□□ 0.17
KCNMA1-236ENST00000638506 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
KCNMA1-236ENST00000638506 RXRBP28702 533 aa16.08■□□□□ 0.16
KCNMA1-236ENST00000638506 TTLL5Q6EMB2 1281 aa16.08■□□□□ 0.16
KCNMA1-236ENST00000638506 FAM173BQ6P4H8 233 aa16.08■□□□□ 0.16
KCNMA1-236ENST00000638506 AGXT2Q9BYV1 514 aa16.08■□□□□ 0.16
KCNMA1-236ENST00000638506 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
KCNMA1-236ENST00000638506 C4BP0C0L5 1744 aa16.08■□□□□ 0.16
KCNMA1-236ENST00000638506 BCORQ6W2J9 1755 aa16.08■□□□□ 0.16
KCNMA1-236ENST00000638506 LAMA4Q16363 1823 aa16.08■□□□□ 0.16
KCNMA1-236ENST00000638506 PI16Q6UXB8 463 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 VGLL2Q8N8G2 317 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 APPBP2Q92624 585 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 APOBRQ0VD83 1088 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 PROM2Q8N271 834 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 DDX11Q96FC9 970 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 ELP1O95163 1332 aa16.07■□□□□ 0.16
KCNMA1-236ENST00000638506 FOXP2O15409 715 aa16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 MCAMP43121 646 aa16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 HS1BP3Q53T59 392 aa16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 MYH3P11055 1940 aa16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 PDE8BO95263 885 aa16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 KLHL34Q8N239 644 aa16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 PUS7LQ9H0K6 701 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-236ENST00000638506 H3BQV1 296 aa16.05■□□□□ 0.16
KCNMA1-236ENST00000638506 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-236ENST00000638506 IFFO2Q5TF58 517 aa16.05■□□□□ 0.16
KCNMA1-236ENST00000638506 AK7Q96M32 723 aa16.05■□□□□ 0.16
KCNMA1-236ENST00000638506 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
KCNMA1-236ENST00000638506 RPS6KA4O75676 772 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 FGAP02671 866 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 RESTQ13127 1097 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 ZSCAN25Q6NSZ9 544 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 CCDC24Q8N4L8 307 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 NSUN7Q8NE18 718 aaKnown RBP16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 ARHGEF1Q92888 912 aaKnown RBP16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 TFIP11Q9UBB9 837 aaKnown RBP16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 CTDNEP1O95476 244 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 TTF1Q15361 905 aaPredicted RBP16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 UVSSAQ2YD98 709 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 ZNF274Q96GC6 653 aaPredicted RBP16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 SPATA32Q96LK8 384 aa16.04■□□□□ 0.16
KCNMA1-236ENST00000638506 GPAA1O43292 621 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 TPM2P07951 284 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 HAND2P61296 217 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 CCT2P78371 535 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 HMGN5P82970 282 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 RC3H1Q5TC82 1133 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 GIMAP6Q6P9H5 292 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 FBXL16Q8N461 479 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 SCN7AQ01118 1682 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 MROH5Q6ZUA9 1318 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 COL4A1P02462 1669 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 PTPDC1A2A3K4 754 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 ADD2P35612 726 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 PUM3Q15397 648 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 CCDC102BQ68D86 513 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 LEO1Q8WVC0 666 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 NAP1L2Q9ULW6 460 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 RTCBQ9Y3I0 505 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 KIF3AQ9Y496 699 aa16.03■□□□□ 0.16
KCNMA1-236ENST00000638506 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 NTSR2O95665 410 aa16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 UQCRFS1P1P0C7P4 283 aa16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 PHKA1P46020 1223 aa16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 SLC9C2Q5TAH2 1124 aa16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 NAA16Q6N069 864 aaPredicted RBP16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 CHMP4CQ96CF2 233 aa16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 FUCA2Q9BTY2 467 aa16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 UTP14AQ9BVJ6 771 aaKnown RBP16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.16
KCNMA1-236ENST00000638506 AKAP11Q9UKA4 1901 aa16.02■□□□□ 0.15
KCNMA1-236ENST00000638506 GOLGA6L4A6NEF3 574 aa16.01■□□□□ 0.15
KCNMA1-236ENST00000638506 TAF1P21675 1872 aa16.01■□□□□ 0.15
KCNMA1-236ENST00000638506 ARID4AP29374 1257 aaPredicted RBP16.01■□□□□ 0.15
KCNMA1-236ENST00000638506 EVCP57679 992 aa16.01■□□□□ 0.15
KCNMA1-236ENST00000638506 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
KCNMA1-236ENST00000638506 C3orf67Q6ZVT6 689 aa16.01■□□□□ 0.15
KCNMA1-236ENST00000638506 HELBQ8NG08 1087 aaPredicted RBP16.01■□□□□ 0.15
KCNMA1-236ENST00000638506 LPIN2Q92539 896 aa16.01■□□□□ 0.15
KCNMA1-236ENST00000638506 NCOA5Q9HCD5 579 aaKnown RBP16.01■□□□□ 0.15
KCNMA1-236ENST00000638506 LIG1P18858 919 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms