RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 ZBED3Q96IU2 234 aaPredicted RBP13.49□□□□□ -0.25
SPTAN1-220ENST00000630147 LEMD3Q9Y2U8 911 aa13.49□□□□□ -0.25
SPTAN1-220ENST00000630147 LAMB1P07942 1786 aa13.49□□□□□ -0.25
SPTAN1-220ENST00000630147 CEP290O15078 2479 aa13.48□□□□□ -0.25
SPTAN1-220ENST00000630147 ECM2O94769 699 aaPredicted RBP13.48□□□□□ -0.25
SPTAN1-220ENST00000630147 CHRNDQ07001 517 aa13.48□□□□□ -0.25
SPTAN1-220ENST00000630147 CFAP100Q494V2 611 aa13.48□□□□□ -0.25
SPTAN1-220ENST00000630147 MPHOSPH8Q99549 860 aa13.48□□□□□ -0.25
SPTAN1-220ENST00000630147 CFHR5Q9BXR6 569 aa13.48□□□□□ -0.25
SPTAN1-220ENST00000630147 CD209Q9NNX6 404 aa13.48□□□□□ -0.25
SPTAN1-220ENST00000630147 PTPN22Q9Y2R2 807 aa13.48□□□□□ -0.25
SPTAN1-220ENST00000630147 ALDH1A1P00352 501 aa13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 RBM5P52756 815 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 GCC1Q96CN9 775 aa13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 PRMT6Q96LA8 375 aaPredicted RBP13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 ANKRD2Q9GZV1 360 aa13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 ELP3Q9H9T3 547 aa13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 CHMP3Q9Y3E7 222 aa13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 COL1A1P02452 1464 aaPredicted RBP13.47□□□□□ -0.25
SPTAN1-220ENST00000630147 H7C1W4 665 aa13.46□□□□□ -0.25
SPTAN1-220ENST00000630147 ERO1AQ96HE7 468 aa13.46□□□□□ -0.25
SPTAN1-220ENST00000630147 PTPN18Q99952 460 aa13.46□□□□□ -0.25
SPTAN1-220ENST00000630147 STK31Q9BXU1 1019 aa13.46□□□□□ -0.25
SPTAN1-220ENST00000630147 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
SPTAN1-220ENST00000630147 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
SPTAN1-220ENST00000630147 PLIN1O60240 522 aa13.45□□□□□ -0.26
SPTAN1-220ENST00000630147 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
SPTAN1-220ENST00000630147 ZBTB48P10074 688 aaPredicted RBP13.45□□□□□ -0.26
SPTAN1-220ENST00000630147 CALD1Q05682 793 aaKnown RBP13.45□□□□□ -0.26
SPTAN1-220ENST00000630147 GCKRQ14397 625 aa13.45□□□□□ -0.26
SPTAN1-220ENST00000630147 EFCC1Q9HA90 598 aa13.45□□□□□ -0.26
SPTAN1-220ENST00000630147 TRIOBPQ9H2D6 2365 aa13.45□□□□□ -0.26
SPTAN1-220ENST00000630147 IRS2Q9Y4H2 1338 aa13.44□□□□□ -0.26
SPTAN1-220ENST00000630147 USP2O75604 605 aaPredicted RBP13.44□□□□□ -0.26
SPTAN1-220ENST00000630147 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
SPTAN1-220ENST00000630147 RASA3Q14644 834 aa13.44□□□□□ -0.26
SPTAN1-220ENST00000630147 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
SPTAN1-220ENST00000630147 OPTNQ96CV9 577 aa13.44□□□□□ -0.26
SPTAN1-220ENST00000630147 ZNF594Q96JF6 807 aaPredicted RBP13.44□□□□□ -0.26
SPTAN1-220ENST00000630147 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 MYO1BO43795 1136 aa13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 IREB2P48200 963 aaKnown RBP13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 FXR1P51114 621 aaKnown RBP eCLIP13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 CASP7P55210 303 aa13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 INHBEP58166 350 aa13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 SP3Q02447 781 aa13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 TWISTNBQ3B726 338 aaPredicted RBP13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 SUPT20HL1Q3ZLR7 823 aa13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 INTS3Q68E01 1043 aaKnown RBP13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 PTCH2Q9Y6C5 1203 aa13.43□□□□□ -0.26
SPTAN1-220ENST00000630147 CSF1RP07333 972 aa13.42□□□□□ -0.26
SPTAN1-220ENST00000630147 FLIIQ13045 1269 aa13.42□□□□□ -0.26
SPTAN1-220ENST00000630147 FKBP5Q13451 457 aaPredicted RBP13.42□□□□□ -0.26
SPTAN1-220ENST00000630147 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
SPTAN1-220ENST00000630147 ARMC5Q96C12 935 aa13.42□□□□□ -0.26
SPTAN1-220ENST00000630147 TDRD3Q9H7E2 651 aaKnown RBP13.42□□□□□ -0.26
SPTAN1-220ENST00000630147 COLQQ9Y215 455 aaPredicted RBP13.42□□□□□ -0.26
SPTAN1-220ENST00000630147 PPP2R3BQ9Y5P8 575 aa13.42□□□□□ -0.26
SPTAN1-220ENST00000630147 ARAP2Q8WZ64 1704 aa13.42□□□□□ -0.26
SPTAN1-220ENST00000630147 TCP10L2B9ZVM9 353 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 OTUD7BQ6GQQ9 843 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 ANKRD13AQ8IZ07 590 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 MTMR14Q8NCE2 650 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 SH3TC2Q8TF17 1288 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 DNAAF4Q8WXU2 420 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 BRI3BPQ8WY22 251 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 PLA2G12BQ9BX93 195 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 ARHGAP39Q9C0H5 1083 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 SZT2Q5T011 3432 aa13.41□□□□□ -0.26
SPTAN1-220ENST00000630147 CCL15-CCL14A0A0B4J2E2 113 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 F6X3S4 739 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 IL1R1P14778 569 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 FOXO4P98177 505 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 VGLL4Q14135 290 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 TAF1CQ15572 869 aaPredicted RBP13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 CCL15Q16663 113 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 SLC4A8Q2Y0W8 1093 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 EPHA10Q5JZY3 1008 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 FAM43AQ8N2R8 423 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 ZNF333Q96JL9 665 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 TMEM106CQ9BVX2 250 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 TMEM39BQ9GZU3 492 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 PRKRIP1Q9H875 184 aaPredicted RBP13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 ZNF70Q9UC06 446 aaPredicted RBP13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 TTF2Q9UNY4 1162 aaKnown RBP13.4□□□□□ -0.26
SPTAN1-220ENST00000630147 GYG1P46976 350 aa13.39□□□□□ -0.27
SPTAN1-220ENST00000630147 MMP14P50281 582 aa13.39□□□□□ -0.27
SPTAN1-220ENST00000630147 CACNB3P54284 484 aa13.39□□□□□ -0.27
SPTAN1-220ENST00000630147 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
SPTAN1-220ENST00000630147 GRIK5Q16478 980 aa13.39□□□□□ -0.27
SPTAN1-220ENST00000630147 TAF7LQ5H9L4 462 aa13.39□□□□□ -0.27
SPTAN1-220ENST00000630147 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.39□□□□□ -0.27
SPTAN1-220ENST00000630147 MS4A4AQ96JQ5 239 aa13.39□□□□□ -0.27
SPTAN1-220ENST00000630147 IQSEC3Q9UPP2 1182 aaPredicted RBP13.39□□□□□ -0.27
SPTAN1-220ENST00000630147 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms